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AT3G21570.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plasma membrane 0.529
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; Has 43 Blast hits to 43 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 43; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410J49DeggNOG:ENOG410ZGM2EMBL:AB019232EMBL:BT021912EMBL:BT026424EMBL:CP002686EnsemblPlants:AT3G21570
EnsemblPlants:AT3G21570.1entrez:821711GeneID:821711Gramene:AT3G21570.1hmmpanther:PTHR33670hmmpanther:PTHR33670:SF1HOGENOM:HOG000090677
KEGG:ath:AT3G21570OMA:IIRPQNCPfam:PF15365PhylomeDB:Q9LVE9Proteomes:UP000006548RefSeq:NP_188794.1TAIR:AT3G21570
UniGene:At.51365UniGene:At.68836UniProt:Q9LVE9
Coordinates (TAIR10) chr3:-:7600297..7600707
Molecular Weight (calculated) 15562.60 Da
IEP (calculated) 11.27
GRAVY (calculated) -0.69
Length 136 amino acids
Sequence (TAIR10)
(BLAST)
001: MGTEIIRPQN CLVDRMRDSP ATFFNSRRNH FHRKPPLKPD QRRRFGSDEF RTTTKNIVRR KGESFDSFSN IKVRKYSPEV SADDIYAGSS IFAVSPAPSS
101: LPLPSFSKKK AKSQVVVVSI DDSASQDLRR LLRLKF
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)