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AT3G21390.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:22426856 (2012): mitochondrion mitochondrial envelope mitochondrial inner membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Mitochondrial substrate carrier family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Mitochondrial substrate carrier family protein; FUNCTIONS IN: binding, transporter activity; INVOLVED IN: transport, mitochondrial transport, transmembrane transport; LOCATED IN: mitochondrial inner membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: Mitochondrial substrate carrier family protein (TAIR:AT5G48970.1); Has 30580 Blast hits to 14322 proteins in 462 species: Archae - 0; Bacteria - 0; Metazoa - 12689; Fungi - 9312; Plants - 5408; Viruses - 0; Other Eukaryotes - 3171 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410ZRF1eggNOG:KOG0752EMBL:AY080592EMBL:AY087894
EMBL:AY122945EMBL:CP002686EnsemblPlants:AT3G21390EnsemblPlants:AT3G21390.1
entrez:821693Gene3D:1.50.40.10GeneID:821693GO:GO:0005739
GO:GO:0016021GO:GO:0030974GO:GO:0055085GO:GO:0090422
Gramene:AT3G21390.1hmmpanther:PTHR24089hmmpanther:PTHR24089:SF326InterPro:IPR002067
InterPro:IPR018108InterPro:IPR023395KEGG:ath:AT3G21390KO:K15108
OMA:VELNAYKPfam:PF00153Pfscan:PS50920PRINTS:PR00926
PROSITE:PS50920Proteomes:UP000006548RefSeq:NP_566683.1SMR:Q8RXZ9
STRING:3702.AT3G21390.1SUPFAM:0048588SUPFAM:SSF103506TAIR:AT3G21390
UniGene:At.43250UniProt:Q8RXZ9
Coordinates (TAIR10) chr3:+:7531971..7534425
Molecular Weight (calculated) 36562.10 Da
IEP (calculated) 9.97
GRAVY (calculated) -0.03
Length 335 amino acids
Sequence (TAIR10)
(BLAST)
001: MSGTELDEPG KLKRAVIDAS AGGVAGAISR MVTSPLDVIK IRFQVQLEPT ATWALKDSQL KPKYNGLFRT TKDIFREEGL SGFWRGNVPA LLMVVPYTSI
101: QFAVLHKVKS FAAGSSKAEN HAQLSPYLSY ISGALAGCAA TVGSYPFDLL RTVLASQGEP KVYPNMRSAF LSIVQTRGIK GLYAGLSPTL IEIIPYAGLQ
201: FGTYDTFKRW SMVYNKRYRS SSSSSTNPSD SLSSFQLFLC GLASGTVSKL VCHPLDVVKK RFQVEGLQRH PKYGARVELN AYKNMFDGLG QILRSEGWHG
301: LYKGIVPSTI KAAPAGAVTF VAYELASDWF EANLT
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)