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AT3G21160.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
golgi 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:25900983 (2015): Golgi Golgi apparatus Golgi membrane
  • PMID:25900983 (2015): Golgi trans-Golgi network early endosome
  • PMID:22923678 (2012): Golgi
  • PMID:22430844 (2012): Golgi
  • PMID:16618929 (2006): Golgi
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : alpha-mannosidase 2
Curator
Summary (TAIR10)
Encodes an alpha-mannosidase I enzyme responsible for N-glycan maturation.
Computational
Description (TAIR10)
alpha-mannosidase 2 (MNS2); CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 47 (InterPro:IPR001382); BEST Arabidopsis thaliana protein match is: alpha-mannosidase 1 (TAIR:AT1G51590.1); Has 2046 Blast hits to 1918 proteins in 195 species: Archae - 0; Bacteria - 11; Metazoa - 790; Fungi - 842; Plants - 175; Viruses - 0; Other Eukaryotes - 228 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G21160-MONOMERBioGrid:7000CAZy:GH47EC:3.2.1.113eggNOG:ENOG410XP04eggNOG:KOG2204EMBL:AB023045
EMBL:AP000604EMBL:AY050776EMBL:BT000893EMBL:CP002686EnsemblPlants:AT3G21160EnsemblPlants:AT3G21160.1entrez:821668
Gene3D:1.50.10.50GeneID:821668Genevisible:Q8H116GO:GO:0000139GO:GO:0004559GO:GO:0004571GO:GO:0005509
GO:GO:0005768GO:GO:0005783GO:GO:0005794GO:GO:0005802GO:GO:0006491GO:GO:0016021Gramene:AT3G21160.1
hmmpanther:PTHR11742hmmpanther:PTHR11742:SF42HOGENOM:HOG000181987InParanoid:Q8H116IntAct:Q8H116InterPro:IPR001382KEGG:00510+3.2.1.113
KEGG:00513+3.2.1.113KEGG:ath:AT3G21160KO:K01230ncoils:CoilOMA:QRHYGRIPaxDb:Q8H116Pfam:PF01532
Pfam:Q8H116PhylomeDB:Q8H116PRIDE:Q8H116PRINTS:PR00747PRO:PR:Q8H116ProteinModelPortal:Q8H116Proteomes:UP000006548
Reactome:R-ATH-964827RefSeq:NP_566675.1SMR:Q8H116STRING:3702.AT3G21160.1SUPFAM:SSF48225TAIR:AT3G21160tair10-symbols:MANIA
tair10-symbols:MNS2TMHMM:TMhelixUniGene:At.25787UniPathway:UPA00378UniProt:Q8H116
Coordinates (TAIR10) chr3:-:7414129..7418328
Molecular Weight (calculated) 65139.60 Da
IEP (calculated) 6.43
GRAVY (calculated) -0.33
Length 572 amino acids
Sequence (TAIR10)
(BLAST)
001: MARNKLVSGS HGIWKYFNPA FYLRRPRRLA LLIILFVSVS MVVWDRQSLS RDYQFEVSKL NEEVLRLQQM LEEIKSVTED VSVNSLKDVQ EDPVDAQRMQ
101: RVKEAMVHAW SSYEKYAWGQ DELQPQTKDG VDSFGGLGAT MIDALDTLYI MGLDEQFQKA REWVASSLDF DKDYAASMFE TTIRVVGGLL SAYDLSGDKI
201: FLEKAMDIAD RLLPAWDTQS GIPYNIINLK HGNAHNPTWA GGDSILADSG TEQLEFIALS QRTGDPKYQQ KVEKVISVLN KNFPADGLLP IYINPDTANP
301: SQSTITFGAM GDSFYEYLLK VWVFGNKTSA VKHYRDMWEK SMNGLLSLVK KSTPLSFTYI CEKSGNSLID KMDELACFAP GMLALGASGY SDPAEGKKFL
401: TLAEELAWTC YNFYQSTPTK LAGENYFFNS GSDMSVGTSW NILRPETVES LFYLWRLTGN KTYQEWGWNI FEAFEKNSRI ESGYVGLKDV NTGVKDNKMQ
501: SFFLAETLKY LYLLFSPTTV IPLDEWVFNT EAHPLKIKSR NDQVNLKQSN KVLLRKPAFR IRQRHYGRIT KK
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)