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AT3G21150.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 1.000
ASURE: nucleus
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data
Description (TAIR10) protein_coding : B-box 32
Curator
Summary (TAIR10)
Encodes a protein with a B-box domain predicted to act as a transcription factor. Expression of the BBX32 gene is affected by monochromatic red light.
Computational
Description (TAIR10)
B-box 32 (BBX32); BEST Arabidopsis thaliana protein match is: B-box type zinc finger family protein (TAIR:AT4G15248.1); Has 926 Blast hits to 858 proteins in 65 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 926; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
BioGrid:6999eggNOG:ENOG410IZ5MeggNOG:ENOG410YSB4EMBL:AK117844EMBL:AP000604EMBL:BT005244EMBL:CP002686
EnsemblPlants:AT3G21150EnsemblPlants:AT3G21150.1entrez:821667GeneID:821667GO:GO:0003700GO:GO:0005634GO:GO:0005737
GO:GO:0006351GO:GO:0006355GO:GO:0009640GO:GO:0009785GO:GO:0009909GO:GO:0010017GO:GO:0010200
GO:GO:0045892GO:GO:0046872Gramene:AT3G21150.1hmmpanther:PTHR31717hmmpanther:PTHR31717:SF11HOGENOM:HOG000090878InParanoid:Q9LJB7
IntAct:Q9LJB7InterPro:IPR000315KEGG:ath:AT3G21150OMA:VEGWDECPaxDb:Q9LJB7Pfam:Q9LJB7PhylomeDB:Q9LJB7
PRIDE:Q9LJB7PRO:PR:Q9LJB7Proteomes:UP000006548RefSeq:NP_188752.1SMART:SM00336STRING:3702.AT3G21150.1TAIR:AT3G21150
tair10-symbols:BBX32UniGene:At.38107UniProt:Q9LJB7
Coordinates (TAIR10) chr3:-:7412713..7413390
Molecular Weight (calculated) 24717.30 Da
IEP (calculated) 8.50
GRAVY (calculated) -0.12
Length 225 amino acids
Sequence (TAIR10)
(BLAST)
001: MVSFCELCGA EADLHCAADS AFLCRSCDAK FHASNFLFAR HFRRVICPNC KSLTQNFVSG PLLPWPPRTT CCSESSSSSC CSSLDCVSSS ELSSTTRDVN
101: RARGRENRVN AKAVAVTVAD GIFVNWCGKL GLNRDLTNAV VSYASLALAV ETRPRATKRV FLAAAFWFGV KNTTTWQNLK KVEDVTGVSA GMIRAVESKL
201: ARAMTQQLRR WRVDSEEGWA ENDNV
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)