AT3G20790.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : NAD(P)-binding Rossmann-fold superfamily protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Oxidoreductase, N-terminal (InterPro:IPR000683), Oxidoreductase, C-terminal (InterPro:IPR004104), NAD(P)-binding domain (InterPro:IPR016040); Has 7400 Blast hits to 7400 proteins in 1508 species: Archae - 172; Bacteria - 5330; Metazoa - 189; Fungi - 322; Plants - 48; Viruses - 0; Other Eukaryotes - 1339 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:7268802..7271099 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 38580.50 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.49 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.02 | ||||||||||||||||||||||||||||||||||||
| Length | 355 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MVNPSSPGIA ILGAGIFVKT QYIPRLAEIS DLVDLKAIWS RTEESAKGAV EIARKHFPEV KCKWGDEGLN EIIQDSSIVG VAVVVAAETM VELSLKMLKA 101: GKHVLQEKPA AASISEIETA MSSYRNISAD SPCRPIWAVA ENYRFEPAFV ELKKLIAEIG DMMNVQLIIE GSMNSSNPYF SSSWRRNLSG GFILDMGVHY 201: IAGLRMLVGC EVTSVSATTT HVDKTLPGPD NITSNFQLEN GCSGVFVMVV SSRSPKILWR IVGLKGTVQL ERGVEGGRHG YMATIYGEGG TSRTIFYPFS 301: GVTEELKAFF NDISETSKEQ EPRLSYVEGA RDVAVLEAML ESGAKNGAVV PVNKF |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)