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AT3G20770.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 1.000
ASURE: nucleus
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Ethylene insensitive 3 family protein
Curator
Summary (TAIR10)
Encodes EIN3 (ethylene-insensitive3), a nuclear transcription factor that initiates downstream transcriptional cascades for ethylene responses.
Computational
Description (TAIR10)
ETHYLENE-INSENSITIVE3 (EIN3); CONTAINS InterPro DOMAIN/s: Ethylene insensitive 3 (InterPro:IPR006957); BEST Arabidopsis thaliana protein match is: ETHYLENE-INSENSITIVE3-like 1 (TAIR:AT2G27050.1); Has 12681 Blast hits to 4386 proteins in 108 species: Archae - 12; Bacteria - 9; Metazoa - 78; Fungi - 631; Plants - 331; Viruses - 0; Other Eukaryotes - 11620 (source: NCBI BLink).
Protein Annotations
BioGrid:6957DIP:DIP-34865NeggNOG:ENOG410IFT4eggNOG:ENOG4110EBSEMBL:AB025629EMBL:AF004216EMBL:AF004217
EMBL:AY069875EMBL:CP002686EnsemblPlants:AT3G20770EnsemblPlants:AT3G20770.1entrez:821625Gene3D:1.10.3180.10GeneID:821625
Genevisible:O24606GO:GO:0001666GO:GO:0003700GO:GO:0005634GO:GO:0006351GO:GO:0006355GO:GO:0009723
GO:GO:0009873GO:GO:0010182GO:GO:0042742GO:GO:0044212GO:GO:0071281Gramene:AT3G20770.1hmmpanther:PTHR33305
hmmpanther:PTHR33305:SF1HOGENOM:HOG000240021IntAct:O24606InterPro:IPR023278KEGG:ath:AT3G20770KO:K14514ncoils:Coil
OMA:FEAAHNNPaxDb:O24606PDB:4ZDSPDBsum:4ZDSPfam:O24606Pfam:PF04873PhylomeDB:O24606
PRIDE:O24606PRO:PR:O24606ProteinModelPortal:O24606Proteomes:UP000006548RefSeq:NP_188713.1SMR:O24606STRING:3702.AT3G20770.1
SUPFAM:0050589SUPFAM:SSF116768TAIR:AT3G20770tair10-symbols:AtEIN3tair10-symbols:EIN3UniGene:At.24824UniProt:O24606
Coordinates (TAIR10) chr3:-:7260702..7262588
Molecular Weight (calculated) 71425.30 Da
IEP (calculated) 5.76
GRAVY (calculated) -0.77
Length 628 amino acids
Sequence (TAIR10)
(BLAST)
001: MMFNEMGMCG NMDFFSSGSL GEVDFCPVPQ AEPDSIVEDD YTDDEIDVDE LERRMWRDKM RLKRLKEQDK GKEGVDAAKQ RQSQEQARRK KMSRAQDGIL
101: KYMLKMMEVC KAQGFVYGII PENGKPVTGA SDNLREWWKD KVRFDRNGPA AITKYQAENN IPGIHEGNNP IGPTPHTLQE LQDTTLGSLL SALMQHCDPP
201: QRRFPLEKGV PPPWWPNGKE DWWPQLGLPK DQGPAPYKKP HDLKKAWKVG VLTAVIKHMF PDIAKIRKLV RQSKCLQDKM TAKESATWLA IINQEESLAR
301: ELYPESCPPL SLSGGSCSLL MNDCSQYDVE GFEKESHYEV EELKPEKVMN SSNFGMVAKM HDFPVKEEVP AGNSEFMRKR KPNRDLNTIM DRTVFTCENL
401: GCAHSEISRG FLDRNSRDNH QLACPHRDSR LPYGAAPSRF HVNEVKPVVG FPQPRPVNSV AQPIDLTGIV PEDGQKMISE LMSMYDRNVQ SNQTSMVMEN
501: QSVSLLQPTV HNHQEHLQFP GNMVEGSFFE DLNIPNRANN NNSSNNQTFF QGNNNNNNVF KFDTADHNNF EAAHNNNNNS SGNRFQLVFD STPFDMASFD
601: YRDDMSMPGV VGTMDGMQQK QQDVSIWF
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)