AT3G20720.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:golgi 0.985 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : | ||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
unknown protein; Has 184 Blast hits to 181 proteins in 66 species: Archae - 0; Bacteria - 2; Metazoa - 137; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). | ||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:7240098..7246754 | ||||||||||||||||||||||||
| Molecular Weight (calculated) | 122854.00 Da | ||||||||||||||||||||||||
| IEP (calculated) | 4.99 | ||||||||||||||||||||||||
| GRAVY (calculated) | -0.13 | ||||||||||||||||||||||||
| Length | 1122 amino acids | ||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
0001: MESILARALE YTLKYWLKSF TRDQFKLQGR TAQLSNLDIN GEAIHASMGL PPALSVTTAK VGKLEIMLPY VSNVQTEPIV VQIDKLDLVL EENPDADVTK 0101: GPSSSQSPTA SAKSNGYGFA DKIADGMTLQ VKVVNLLLET GGGANREGGA AWAAPLASIT IRNLVLYTTN ESWKVVNLKE ARDFSTNTGF IYLFKKLEWE 0201: ALSIDLLPHP DMFTEANLAR SEEANLRDED GAKRITVQRT ALNSPLGLEV QLHIPEAVCP ALSEPGLRAL LRFLTGMYLC LNRGDVDPKS QQSAEAAGRS 0301: LVSVLVDHVF LCIKDAEFQL ELLMQSLLFS RACVSDGESA NYLTKILIGG LFLRDAFSRS PCALIQPSMK AAAEDLAIPD FAKNFCPLIY PLDSGPWQIV 0401: QDVPLISLHS LQVKPSPKPP HFFSKTVIQC QPLMVHLQEE ACLRISSFLA DGIVVNPGDV LPDNSVNSLL FTLKELDVSV PLDMSNLQDS AIEEDLSVKK 0501: SFVGARLHIE NLSFAESPTL KVRLLNLEKD PACFCLWPGQ PIDASQKKWT AGASHFSLAL ETSPNSTQLQ SPRGPEMGLW NCVEGKDVSI EVAMVSADGK 0601: PLITIPPPGG IVRIGVACEQ YISRASVEQL FFVLDLYSYF GKVSEKISIV KESKRQNTVS LTGGLLEKVP SDTAVKLALK DLQLKFLESS FTSTQDMPLV 0701: QFLGKDLSVK VTHRTLGGAI AVSSNIYWEN IEVDCVDTDV EHEHENSWNG HLVSCNGSTP LRRVFWVVNG RHDEHSGSTL TPFLDISITH VIPLSEKDME 0801: CHSVSIVAYG TPGNWNGDGF PHLGRPDDID VSVELRDWLF ALEGREGVGT RILNNEDIGR EERCWHTNFR TFRVIAKSTP KNVDSNGTEN QCDAHKYPVD 0901: SIIVSVEGLQ TVKPQMQKGT DSCNGLSTNG VHENGQMHGG VNIEANIVAS EDKSVHDDLL NWVAESLKFS VKQPVEAVVT KDELQHLTFL CKSEIDAMGR 1001: IVAGVLRVLK LEESIGQATL NQLSNLGSEG FDKMFSPKAS RAGSPKSSPF AASLDSMREI SLRANLESTI SSIEEASMEL EAKCSALVSD LNDSESSAKH 1101: ANELKQKLES LQSLMAKLRT QI |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)