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AT3G20530.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
extracellular 0.981
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Protein kinase superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G18610.2); Has 115048 Blast hits to 113699 proteins in 4223 species: Archae - 109; Bacteria - 13576; Metazoa - 42161; Fungi - 9618; Plants - 32810; Viruses - 348; Other Eukaryotes - 16426 (source: NCBI BLink).
Protein Annotations
eggNOG:COG0515eggNOG:KOG1187EMBL:CP002686EnsemblPlants:AT3G20530EnsemblPlants:AT3G20530.1entrez:821599Gene3D:2.60.120.200
GeneID:821599GO:GO:0004674GO:GO:0005524Gramene:AT3G20530.1hmmpanther:PTHR27001hmmpanther:PTHR27001:SF127InParanoid:F4JEQ2
InterPro:IPR000719InterPro:IPR008271InterPro:IPR011009InterPro:IPR013320InterPro:IPR017441KEGG:ath:AT3G20530ncoils:Coil
OMA:GHIESKNPaxDb:F4JEQ2Pfam:PF00069Pfscan:PS50011PRIDE:F4JEQ2PROSITE:PS00107PROSITE:PS00108
PROSITE:PS50011ProteinModelPortal:F4JEQ2Proteomes:UP000006548Reactome:R-ATH-450302Reactome:R-ATH-450321RefSeq:NP_188689.1scanprosite:PS00107
scanprosite:PS00108SMR:F4JEQ2STRING:3702.AT3G20530.1SUPFAM:SSF56112TAIR:AT3G20530UniGene:At.38223UniProt:F4JEQ2
Coordinates (TAIR10) chr3:+:7166318..7167806
Molecular Weight (calculated) 43644.10 Da
IEP (calculated) 5.54
GRAVY (calculated) -0.42
Length 386 amino acids
Sequence (TAIR10)
(BLAST)
001: MKINCLFCCM SHRRFNRRSS SRQSIKDCID AKNNITTFDN ISFKTDSSRR RYISEEIAKL GKGNISAHIF TFRELCVATK NFNPDNQLGE GGFGRVYKGQ
101: IETPEQVVAV KQLDRNGYQG NREFLVEVMM LSLLHHQNLV NLVGYCADGD QRILVYEYMQ NGSLEDHLLE LARNKKKPLD WDTRMKVAAG AARGLEYLHE
201: TADPPVIYRD FKASNILLDE EFNPKLSDFG LAKVGPTGGE THVSTRVMGT YGYCAPEYAL TGQLTVKSDV YSFGVVFLEM ITGRRVIDTT KPTEEQNLVT
301: WASPLFKDRR KFTLMADPLL EGKYPIKGLY QALAVAAMCL QEEAATRPMM SDVVTALEYL AVTKTEEDGQ TVEGEEEEEE DERSKL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)