AT3G20130.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : cytochrome P450, family 705, subfamily A, polypeptide 22 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
member of CYP705A | ||||||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
cytochrome P450, family 705, subfamily A, polypeptide 22 (CYP705A22); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: root, carpel; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 705, subfamily A, polypeptide 3 (TAIR:AT4G15360.1); Has 32704 Blast hits to 32445 proteins in 1637 species: Archae - 48; Bacteria - 3152; Metazoa - 11633; Fungi - 7273; Plants - 9456; Viruses - 6; Other Eukaryotes - 1136 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:7026982..7028613 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 58712.10 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.09 | ||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.09 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 515 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MEAVISFDFQ NCFIFILIFL LTFLCFFFFF KKPKDSRVNF DLPPSPPSLP IIGHVHLLLS TLTHKSLQKL SSRYGPLLYL RIFNVPIILV SSASVAYEIF 101: RTQDVNISSR GVTAVDESLV FGSSSFVTAP YGDYWKFMKK LTVMKLLGPQ AQEQSRDIRA DDIKRFCRNL LDKARKKESV EIGKEAMNLM NNILCKMSMG 201: RSFSEENGET EKLRGLVTES IGLMKKMFLA VLLRRQLQKL GISLFKKDIM GVSNKFDVLL EKVLVEHREK PEKDQGTVML DVLLAAYGDE NAEYKITKNH 301: IKAFFVDLFI GATDTSVQTI QWTMAEIMNN THILERMREE IDSVVGKSRL IQETDLPNLP YLHAVIKEAL RLHPPGPLLP REFQQGCKIG GFYIPEKTTL 401: LINAYVVMRD PNVWEDPEEF KPERFLASSR SGQEDERREQ ALKFLPFGSG RRGCPGSNLA YMIVGSAIGM MVQCFDWRIE GEKVNMKEAV KGTILTMAHP 501: LKLTPVTRQP PLTWI |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)