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AT3G20110.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
endoplasmic reticulum 0.870
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : cytochrome P450, family 705, subfamily A, polypeptide 20
Curator
Summary (TAIR10)
member of CYP705A
Computational
Description (TAIR10)
cytochrome P450, family 705, subfamily A, polypeptide 20 (CYP705A20); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: hypocotyl, root; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 705, subfamily A, polypeptide 19 (TAIR:AT3G20100.1); Has 35155 Blast hits to 34985 proteins in 1775 species: Archae - 57; Bacteria - 5353; Metazoa - 11481; Fungi - 7177; Plants - 9434; Viruses - 6; Other Eukaryotes - 1647 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G20110-MONOMEREC:1.14.-.-eggNOG:COG2124eggNOG:KOG0156EMBL:AK118830EMBL:AP000383EMBL:BT006102
EMBL:CP002686EnsemblPlants:AT3G20110EnsemblPlants:AT3G20110.1entrez:821554Gene3D:1.10.630.10GeneID:821554Genevisible:Q9LJY7
GO:GO:0005506GO:GO:0016020GO:GO:0016021GO:GO:0016709GO:GO:0020037GO:GO:0044550Gramene:AT3G20110.1
hmmpanther:PTHR24298hmmpanther:PTHR24298:SF59HOGENOM:HOG000218628InParanoid:Q9LJY7IntAct:Q9LJY7InterPro:IPR001128InterPro:IPR002401
InterPro:IPR017972iPTMnet:Q9LJY7KEGG:ath:AT3G20110OMA:HINACTLPaxDb:Q9LJY7Pfam:PF00067Pfam:Q9LJY7
PhylomeDB:Q9LJY7PRIDE:Q9LJY7PRINTS:PR00385PRINTS:PR00463PRO:PR:Q9LJY7PROSITE:PS00086ProteinModelPortal:Q9LJY7
Proteomes:UP000006548RefSeq:NP_188646.1scanprosite:PS00086SMR:Q9LJY7STRING:3702.AT3G20110.1SUPFAM:SSF48264TAIR:AT3G20110
tair10-symbols:CYP705A20TMHMM:TMhelixUniGene:At.38302UniProt:Q9LJY7
Coordinates (TAIR10) chr3:+:7021495..7023113
Molecular Weight (calculated) 58052.00 Da
IEP (calculated) 8.53
GRAVY (calculated) -0.15
Length 510 amino acids
Sequence (TAIR10)
(BLAST)
001: MLTVDSQHCF SFILLCFFSL LCYSLLFKKL KDSHVGRDLL QSPPSLPIIG HLHHLLSSLA HKSLQQLSSK YGPLLHLSIF NFPVVLVSSA SVAYEIFKAH
101: DLNISSRDNP PINESLLVGS SVFVGAPYGD YWKFMKKLLV TKLLGPQALE RSRSIRADEL ERFYRSLLDK AMKKESVEIG KEATKLSINS ICRMSMGRSF
201: SEESGEAERV RGLVTELDGL TKKVLLVNIL RWPLEKLRIS LFKKEIMYVS NSFDELLERI IVEREKKPNE HQGTYLMDVL LEAYEDEKAE HKITRNHIKS
301: LFVELLLGGT DTSAQTIQWT MAELINNRNV LKRLREEIDS VVGETRLIQE KDLPKLPYLQ SVVKEGLRLH PPLPLMVRTF QRSCEMKGFY IAEKTTLVVN
401: AYAVMRDPTT WEDPDEFKPE RFLRQEEERR ALKHIAFGSG RRGCPGSNLA TIFIGTAIGT MVQCFDLSIK GDKVKMDEVG GLNLTMAHPL ECILVPRTQP
501: FISNQQIPSL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)