AT3G20080.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:extracellular 0.560 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : cytochrome P450, family 705, subfamily A, polypeptide 15 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
member of CYP705A | ||||||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
cytochrome P450, family 705, subfamily A, polypeptide 15 (CYP705A15); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 705, subfamily A, polypeptide 4 (TAIR:AT4G15380.1); Has 32700 Blast hits to 32491 proteins in 1676 species: Archae - 51; Bacteria - 3683; Metazoa - 11407; Fungi - 7150; Plants - 9260; Viruses - 6; Other Eukaryotes - 1143 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:7008813..7010463 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 59360.90 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.26 | ||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.12 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 523 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MAAMNIVDFQ NCFFFVLLSL FSLLCYSLFF RKPKEPRLHY DLPPSPPTLP IIGHLHLLLS VLVHRSLQTL STKYGSILYL RVFSFPVALV SSASIAYEIF 101: REHDVNISSR GFPPTDDSLF AGSFSFTSAP YGDYWKFMKK LLVTNLLGPQ ALERSRGFRA DELDLFYENL LDKAMKKESV DICVEALKLS NNSICKMIMG 201: RSCSEENGEA ERVRALATQL DGLTKKILLA NMLRAGFKKL VVSLFRKEMM DVSSRFDELL ERILVEHEDK LDMHHQGTDL VDALLAACRD KNAEYKISRN 301: HIKSFFADLL FASTDTFVQT TQWTVAEIIN NPNVLERLRG EIDSVVGKAR LIQETDLPNL PYLQAVVKEG LRLHPPGPLF ARFSQEGCRI GGFYVPEKTT 401: LMINAYAVMR DSDSWEDPDE FKPERFLASS RSEQEKERRE QAIKYIAFGS GRRSCPGENL AYIFLGTAIG VMVQGFEWRI KEEKVNMEEA NVGLSLTMAY 501: PLKVTPVPRT LVPLTQNPLN RSS |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)