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AT3G20080.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
extracellular 0.552
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : cytochrome P450, family 705, subfamily A, polypeptide 15
Curator
Summary (TAIR10)
member of CYP705A
Computational
Description (TAIR10)
cytochrome P450, family 705, subfamily A, polypeptide 15 (CYP705A15); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 705, subfamily A, polypeptide 4 (TAIR:AT4G15380.1); Has 32700 Blast hits to 32491 proteins in 1676 species: Archae - 51; Bacteria - 3683; Metazoa - 11407; Fungi - 7150; Plants - 9260; Viruses - 6; Other Eukaryotes - 1143 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G20080-MONOMERBioCyc:ARA:GQT-323-MONOMERBioCyc:ARA:GQT-324-MONOMEReggNOG:COG2124eggNOG:KOG0156EMBL:AP000383EMBL:CP002686
EnsemblPlants:AT3G20080EnsemblPlants:AT3G20080.1EnsemblPlants:AT3G20080.2entrez:821548ExpressionAtlas:Q9LJZ2Gene3D:1.10.630.10GeneID:821548
GO:GO:0005506GO:GO:0016020GO:GO:0016021GO:GO:0016709GO:GO:0020037GO:GO:0044550Gramene:AT3G20080.1
Gramene:AT3G20080.2hmmpanther:PTHR24298hmmpanther:PTHR24298:SF59IntAct:Q9LJZ2InterPro:IPR001128InterPro:IPR002401InterPro:IPR017972
KEGG:ath:AT3G20080OMA:FEWRIKEPfam:PF00067PhylomeDB:Q9LJZ2PRINTS:PR00385PRINTS:PR00463PROSITE:PS00086
Proteomes:UP000006548RefSeq:NP_566654.1RefSeq:NP_974343.1scanprosite:PS00086SMR:Q9LJZ2STRING:3702.AT3G20080.1SUPFAM:SSF48264
TAIR:AT3G20080tair10-symbols:CYP705A15TMHMM:TMhelixUniGene:At.27068UniProt:Q9LJZ2
Coordinates (TAIR10) chr3:+:7008813..7010463
Molecular Weight (calculated) 59360.90 Da
IEP (calculated) 7.26
GRAVY (calculated) -0.12
Length 523 amino acids
Sequence (TAIR10)
(BLAST)
001: MAAMNIVDFQ NCFFFVLLSL FSLLCYSLFF RKPKEPRLHY DLPPSPPTLP IIGHLHLLLS VLVHRSLQTL STKYGSILYL RVFSFPVALV SSASIAYEIF
101: REHDVNISSR GFPPTDDSLF AGSFSFTSAP YGDYWKFMKK LLVTNLLGPQ ALERSRGFRA DELDLFYENL LDKAMKKESV DICVEALKLS NNSICKMIMG
201: RSCSEENGEA ERVRALATQL DGLTKKILLA NMLRAGFKKL VVSLFRKEMM DVSSRFDELL ERILVEHEDK LDMHHQGTDL VDALLAACRD KNAEYKISRN
301: HIKSFFADLL FASTDTFVQT TQWTVAEIIN NPNVLERLRG EIDSVVGKAR LIQETDLPNL PYLQAVVKEG LRLHPPGPLF ARFSQEGCRI GGFYVPEKTT
401: LMINAYAVMR DSDSWEDPDE FKPERFLASS RSEQEKERRE QAIKYIAFGS GRRSCPGENL AYIFLGTAIG VMVQGFEWRI KEEKVNMEEA NVGLSLTMAY
501: PLKVTPVPRT LVPLTQNPLN RSS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)