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AT3G19980.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : flower-specific, phytochrome-associated protein phosphatase 3
Curator
Summary (TAIR10)
Encodes catalytic subunit of serine/threonine protein phosphatase 2A. It can associate with phytochromes A and B in vitro. Mutant plants display an accelerated flowering phenotype.
Computational
Description (TAIR10)
flower-specific, phytochrome-associated protein phosphatase 3 (FYPP3); CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843), Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase (InterPro:IPR006186); BEST Arabidopsis thaliana protein match is: Calcineurin-like metallo-phosphoesterase superfamily protein (TAIR:AT1G50370.1); Has 6822 Blast hits to 6670 proteins in 515 species: Archae - 81; Bacteria - 277; Metazoa - 2341; Fungi - 1410; Plants - 975; Viruses - 8; Other Eukaryotes - 1730 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G19980-MONOMERBioGrid:6868EC:3.1.3.16eggNOG:ENOG410XNR9eggNOG:KOG0373EMBL:AF275664EMBL:AP002050
EMBL:AY064136EMBL:AY097414EMBL:CP002686EnsemblPlants:AT3G19980EnsemblPlants:AT3G19980.1entrez:821536Gene3D:3.60.21.10
GeneID:821536Genevisible:Q9LHE7GO:GO:0000159GO:GO:0004674GO:GO:0004721GO:GO:0005634GO:GO:0005737
GO:GO:0006468GO:GO:0009910GO:GO:0046872Gramene:AT3G19980.1hmmpanther:PTHR11668hmmpanther:PTHR11668:SF289HOGENOM:HOG000172696
InParanoid:Q9LHE7InterPro:IPR004843InterPro:IPR006186InterPro:IPR029052KEGG:ath:AT3G19980KO:K15498OMA:YKYHFPE
PaxDb:Q9LHE7Pfam:PF00149Pfam:Q9LHE7PhylomeDB:Q9LHE7PRIDE:Q9LHE7PRINTS:PR00114PRO:PR:Q9LHE7
PROSITE:PS00125ProteinModelPortal:Q9LHE7Proteomes:UP000006548RefSeq:NP_188632.1scanprosite:PS00125SMART:SM00156SMR:Q9LHE7
STRING:3702.AT3G19980.1SUPFAM:SSF56300TAIR:AT3G19980tair10-symbols:ATFYPP3tair10-symbols:EMB2736tair10-symbols:FYPP3tair10-symbols:STPP
UniGene:At.5940UniProt:Q9LHE7
Coordinates (TAIR10) chr3:+:6962008..6964761
Molecular Weight (calculated) 34847.40 Da
IEP (calculated) 4.70
GRAVY (calculated) -0.29
Length 303 amino acids
Sequence (TAIR10)
(BLAST)
001: MDLDQWISKV KDGQHLSEDE LQLLCEYVKE ILIEESNVQP VNSPVTVCGD IHGQFHDLMK LFQTGGHVPD TNYIFMGDFV DRGYNSLEVF TILLLLKARY
101: PANITLLRGN HESRQLTQVY GFYDECQRKY GNANAWRYCT DVFDYLTLSA IIDGTVLCVH GGLSPDVRTI DQIRLIERNC EIPHEGPFCD LMWSDPEDIE
201: TWAVSPRGAG WLFGSRVTTE FNHINKLDLV CRAHQLVQEG LKYMFQDKGL VTVWSAPNYC YRCGNVASIL SFNDNMEREV KFFTETEENN QMRGPRTGVP
301: YFL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)