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AT3G19720.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plastid 1.000
ASURE: plastid
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:23396599 (2013): nucleus nuclear envelope nuclear inner membrane
  • PMID:21433285 (2011): plasma membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : P-loop containing nucleoside triphosphate hydrolases superfamily protein
Curator
Summary (TAIR10)
Encodes a novel chloroplast division protein. Mutants of exhibit defects in chloroplast constriction, have enlarged, dumbbell-shaped chloroplasts. The ARC5 gene product shares similarity with the dynamin family of GTPases, which mediate endocytosis, mitochondrial division, and other organellar fission and fusion events in eukaryotes. Phylogenetic analysis showed that ARC5 is related to a group of dynamin-like proteins unique to plants. A GFP–ARC5 fusion protein localizes to a ring at the chloroplast division site. Chloroplast import and protease protection assays indicate that the ARC5 ring is positioned on the outer surface of the chloroplast. Facilitates separation of the two daughter chloroplasts.
Computational
Description (TAIR10)
ACCUMULATION AND REPLICATION OF CHLOROPLAST 5 (ARC5); FUNCTIONS IN: GTP binding, GTPase activity; INVOLVED IN: chloroplast fission, peroxisome fission; LOCATED IN: chloroplast outer membrane, peroxisome, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Dynamin, GTPase domain (InterPro:IPR001401); BEST Arabidopsis thaliana protein match is: Dynamin related protein 5A (TAIR:AT1G53140.1); Has 2186 Blast hits to 2177 proteins in 279 species: Archae - 0; Bacteria - 10; Metazoa - 945; Fungi - 507; Plants - 452; Viruses - 0; Other Eukaryotes - 272 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G19720-MONOMERBioGrid:6842EC:3.6.5.5eggNOG:COG0699eggNOG:KOG0446EMBL:AP000417EMBL:AY212885
EMBL:CP002686EnsemblPlants:AT3G19720EnsemblPlants:AT3G19720.1entrez:821509ExpressionAtlas:Q84N64Gene3D:3.40.50.300GeneID:821509
Genevisible:Q84N64GO:GO:0005525GO:GO:0005777GO:GO:0007623GO:GO:0009507GO:GO:0009707GO:GO:0010020
GO:GO:0016559GO:GO:0016787GO:GO:0042802hmmpanther:PTHR11566hmmpanther:PTHR11566:SF78HOGENOM:HOG000029906InParanoid:Q84N64
InterPro:IPR001401InterPro:IPR022812InterPro:IPR027417InterPro:IPR030381iPTMnet:Q84N64PANTHER:PTHR11566PaxDb:Q84N64
Pfam:PF00350Pfam:Q84N64Pfscan:PS51718PhylomeDB:Q84N64PIR:T52402PRIDE:Q84N64PRINTS:PR00195
PRO:PR:Q84N64PROSITE:PS51718ProteinModelPortal:Q84N64Proteomes:UP000006548RefSeq:NP_188606.2RefSeq:NP_850615.2SMART:SM00053
SMR:Q84N64STRING:3702.AT3G19720.1SUPFAM:SSF52540TAIR:AT3G19720tair10-symbols:ARC5tair10-symbols:DRP5BUniGene:At.38361
UniProt:Q84N64
Coordinates (TAIR10) chr3:-:6850591..6855389
Molecular Weight (calculated) 87175.60 Da
IEP (calculated) 6.66
GRAVY (calculated) -0.28
Length 777 amino acids
Sequence (TAIR10)
(BLAST)
001: MAEVSAKSVT VEEMAEEDDA AIEERWSLYE AYNELHALAQ ELETPFEAPA VLVVGQQTDG KSALVEALMG FQFNHVGGGT KTRRPITLHM KYDPQCQFPL
101: CHLGSDDDPS VSLPKSLSQI QAYIEAENMR LEQEPCSPFS AKEIIVKVQY KYCPNLTIID TPGLIAPAPG LKNRALQVQA RAVEALVRAK MQHKEFIILC
201: LEDSSDWSIA TTRRIVMQVD PELSRTIVVS TKLDTKIPQF SCSSDVEVFL SPPASALDSS LLGDSPFFTS VPSGRVGYGQ DSVYKSNDEF KQAVSLREME
301: DIASLEKKLG RLLTKQEKSR IGISKLRLFL EELLWKRYKE SVPLIIPLLG KEYRSTVRKL DTVSKELSSL DEAKLKERGR TFHDLFLTKL SLLLKGTVVA
401: PPDKFGETLQ DERTQGGAFV GTDGLQFSHK LIPNAGMRLY GGAQYHRAMA EFRFLVGAIK CPPITREEIV NACGVEDIHD GTNYSRTACV IAVAKARETF
501: EPFLHQLGAR LLHILKRLLP ISVYLLQKEG EYLSGHEVFL KRVASAFNSF VESTEKSCRD KCMEDLASTT RYVTWSLHNK NRAGLRQFLD SFGGTEHNTT
601: SGNAIGFSLP QDALGGTTDT KSRSDVKLSH LASNIDSGSS IQTTEMRLAD LLDSTLWNRK LAPSSERIVY ALVQQIFQGI REYFLASAEL KFNCFLLMPI
701: VDKLPALLRE ELENAFEDDL DSIFDITNLR QSLDQKKRST EIELRRIKRI KEKFRVMNEK LNSHEFAQNL KAPSVQH
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)