AT3G19300.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Protein kinase superfamily protein | ||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G49730.1); Has 120929 Blast hits to 119432 proteins in 4683 species: Archae - 125; Bacteria - 14225; Metazoa - 45087; Fungi - 10031; Plants - 33279; Viruses - 564; Other Eukaryotes - 17618 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:6690242..6693210 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 73040.40 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.77 | ||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.08 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 663 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MVLVYNQALL LAFFALLGFQ YFPLLTEAGC PLDFTSSNFT LVASVCSNNT ERAKCCRYMN AFVAISVARY ANYTADLGVT SDLTEICITT ISRTMELYGI 101: PRNATIFCGL GTKILVNYDC EGLTTVPPML HSTSFGDVSR NCKLPLPPGD QCRNCLNSSI SYLRSLVGAD NSIKLSTCRD ATYAVLASRV DNSSALELAS 201: CFFNVPELSP TPGSSPSSLS PEASPPVLAD SPSSDNLVLS PLKSHHPYHL TMVPTIGIAV TVFALVMVVV LIVLIQRKKR ELDDSKSIAC NLTRTSPSPR 301: PRSMIHEGNS FGFRKFSYKE IRKATEDFNA VIGRGGFGTV YKAEFSNGLV AAVKKMNKSS EQAEDEFCRE IELLARLHHR HLVALKGFCN KKNERFLVYE 401: YMENGSLKDH LHSTEKSPLS WESRMKIAID VANALEYLHF YCDPPLCHRD IKSSNILLDE HFVAKLADFG LAHASRDGSI CFEPVNTDIR GTPGYVDPEY 501: VVTHELTEKS DVYSYGVVLL EIITGKRAVD EGRNLVELSQ PLLVSESRRI DLVDPRIKDC IDGEQLETVV AVVRWCTEKE GVARPSIKQV LRLLYESCDP 601: LHLGLAMAVE ENKGRSLRGD SGFQSGDIRG LASSSSTTSR SHCSRSFLLE TGSPHSPPNG LSF |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)