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AT3G19290.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 1.000
ASURE: nucleus
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : ABRE binding factor 4
Curator
Summary (TAIR10)
bZIP transcription factor with specificity for abscisic acid-responsive elements (ABRE). Mediate ABA-dependent stress responses.
Computational
Description (TAIR10)
ABRE binding factor 4 (ABF4); FUNCTIONS IN: protein binding, DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: abscisic acid responsive element-binding factor 1 (TAIR:AT1G49720.1); Has 5268 Blast hits to 4676 proteins in 263 species: Archae - 0; Bacteria - 14; Metazoa - 1616; Fungi - 400; Plants - 1635; Viruses - 0; Other Eukaryotes - 1603 (source: NCBI BLink).
Protein Annotations
BioGrid:6796eggNOG:ENOG410IFYJeggNOG:ENOG410YB2MEMBL:AB017161EMBL:AB025624EMBL:AF093547EMBL:AY050897
EMBL:AY091298EMBL:CP002686EnsemblPlants:AT3G19290EnsemblPlants:AT3G19290.1entrez:821463ExpressionAtlas:Q9M7Q2GeneID:821463
Genevisible:Q9M7Q2GO:GO:0003700GO:GO:0005634GO:GO:0006351GO:GO:0009738GO:GO:0043565hmmpanther:PTHR22952
hmmpanther:PTHR22952:SF158HOGENOM:HOG000237278IntAct:Q9M7Q2InterPro:IPR004827iPTMnet:Q9M7Q2ncoils:CoilPaxDb:Q9M7Q2
Pfam:PF00170Pfam:Q9M7Q2Pfscan:PS50217PhylomeDB:Q9M7Q2PRO:PR:Q9M7Q2PROSITE:PS00036PROSITE:PS50217
ProteinModelPortal:Q9M7Q2Proteomes:UP000006548RefSeq:NP_566629.1scanprosite:PS00036SMART:SM00338SMR:Q9M7Q2STRING:3702.AT3G19290.3
SUPFAM:SSF57959TAIR:AT3G19290tair10-symbols:ABF4tair10-symbols:AREB2UniGene:At.23993UniProt:Q9M7Q2
Coordinates (TAIR10) chr3:+:6687956..6689784
Molecular Weight (calculated) 46495.00 Da
IEP (calculated) 10.20
GRAVY (calculated) -0.74
Length 431 amino acids
Sequence (TAIR10)
(BLAST)
001: MGTHINFNNL GGGGHPGGEG SSNQMKPTGS VMPLARQSSV YSLTFDELQN TLGGPGKDFG SMNMDELLKS IWTAEEAQAM AMTSAPAATA VAQPGAGIPP
101: PGGNLQRQGS LTLPRTISQK TVDEVWKCLI TKDGNMEGSS GGGGESNVPP GRQQTLGEMT LEEFLFRAGV VREDNCVQQM GQVNGNNNNG FYGNSTAAGG
201: LGFGFGQPNQ NSITFNGTND SMILNQPPGL GLKMGGTMQQ QQQQQQLLQQ QQQQMQQLNQ PHPQQRLPQT IFPKQANVAF SAPVNITNKG FAGAANNSIN
301: NNNGLASYGG TGVTVAATSP GTSSAENNSL SPVPYVLNRG RRSNTGLEKV IERRQRRMIK NRESAARSRA RKQAYTLELE AEIEKLKKTN QELQKKQAEM
401: VEMQKNELKE TSKRPWGSKR QCLRRTLTGP W
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)