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AT3G19170.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plastid 0.500
mitochondrion 0.500
ASURE: mitochondrion,plastid
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : presequence protease 1
Curator
Summary (TAIR10)
Zinc metalloprotease pitrilysin subfamily A. Signal peptide degrading enzyme targeted to mitochondria and chloroplasts. Expressed only in siliques and flowers
Computational
Description (TAIR10)
presequence protease 1 (PREP1); FUNCTIONS IN: metalloendopeptidase activity; INVOLVED IN: response to cadmium ion, proteolysis, protein maturation by peptide bond cleavage; LOCATED IN: mitochondrion, apoplast, chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M16, C-terminal (InterPro:IPR007863), Peptidase M16C associated (InterPro:IPR013578), Peptidase M16, N-terminal (InterPro:IPR011765), Metalloenzyme, LuxS/M16 peptidase-like, metal-binding (InterPro:IPR011249), Peptidase M16, core (InterPro:IPR011237); BEST Arabidopsis thaliana protein match is: presequence protease 2 (TAIR:AT1G49630.2); Has 4222 Blast hits to 4196 proteins in 1321 species: Archae - 9; Bacteria - 2812; Metazoa - 224; Fungi - 268; Plants - 81; Viruses - 0; Other Eukaryotes - 828 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:GQT-1641-MONOMERBioCyc:ARA:GQT-1642-MONOMERBioGrid:6784EC:3.4.24.-eggNOG:COG1026eggNOG:KOG2019EMBL:AP000419
EMBL:AY090240EMBL:AY091051EMBL:BT002372EMBL:BT006362EMBL:CP002686EnsemblPlants:AT3G19170EnsemblPlants:AT3G19170.1
entrez:821451EvolutionaryTrace:Q9LJL3ExpressionAtlas:Q9LJL3Gene3D:3.30.830.10GeneID:821451Genevisible:Q9LJL3GO:GO:0004222
GO:GO:0005739GO:GO:0005759GO:GO:0008270GO:GO:0009507GO:GO:0009570GO:GO:0009941GO:GO:0016485
GO:GO:0046686GO:GO:0048046hmmpanther:PTHR11851hmmpanther:PTHR11851:SF68HOGENOM:HOG000008829InParanoid:Q9LJL3IntAct:Q9LJL3
InterPro:IPR007863InterPro:IPR011237InterPro:IPR011249InterPro:IPR011765InterPro:IPR013578iPTMnet:Q9LJL3MEROPS:M16.012
MINT:MINT-7231907ncoils:CoilOMA:HAANKERPaxDb:Q9LJL3PDB:2FGEPDBsum:2FGEPfam:PF00675
Pfam:PF05193Pfam:PF08367Pfam:Q9LJL3PhylomeDB:Q9LJL3PRIDE:Q9LJL3PRO:PR:Q9LJL3ProteinModelPortal:Q9LJL3
Proteomes:UP000006548RefSeq:NP_188548.2SMART:SM01264SMR:Q9LJL3STRING:3702.AT3G19170.1SUPFAM:SSF63411TAIR:AT3G19170
tair10-symbols:ATPREP1tair10-symbols:ATZNMPtair10-symbols:PREP1UniGene:At.27915UniProt:Q9LJL3
Coordinates (TAIR10) chr3:-:6625578..6631874
Molecular Weight (calculated) 121021.00 Da
IEP (calculated) 5.38
GRAVY (calculated) -0.32
Length 1080 amino acids
Sequence (TAIR10)
(BLAST)
0001: MLRTVSCLAS RSSSSLFFRF FRQFPRSYMS LTSSTAALRV PSRNLRRISS PSVAGRRLLL RRGLRIPSAA VRSVNGQFSR LSVRAVATQP APLYPDVGQD
0101: EAEKLGFEKV SEEFISECKS KAILFKHKKT GCEVMSVSNE DENKVFGVVF RTPPKDSTGI PHILEHSVLC GSRKYPVKEP FVELLKGSLH TFLNAFTYPD
0201: RTCYPVASTN TKDFYNLVDV YLDAVFFPKC VDDAHTFQQE GWHYELNDPS EDISYKGVVF NEMKGVYSQP DNILGRIAQQ ALSPENTYGV DSGGDPKDIP
0301: NLTFEEFKEF HRQYYHPSNA RIWFYGDDDP VHRLRVLSEY LDMFEASPSP NSSKIKFQKL FSEPVRLVEK YPAGRDGDLK KKHMLCVNWL LSEKPLDLQT
0401: QLALGFLDHL MLGTPASPLR KILLESGLGE ALVSSGLSDE LLQPQFGIGL KGVSEENVQK VEELIMDTLK KLAEEGFDND AVEASMNTIE FSLRENNTGS
0501: FPRGLSLMLQ SISKWIYDMD PFEPLKYTEP LKALKTRIAE EGSKAVFSPL IEKLILNNSH RVTIEMQPDP EKATQEEVEE KNILEKVKAA MTEEDLAELA
0601: RATEELKLKQ ETPDPPEALR CVPSLNLGDI PKEPTYVPTE VGDINGVKVL RHDLFTNDII YTEVVFDIGS LKHELLPLVP LFCQSLLEMG TKDLTFVQLN
0701: QLIGRKTGGI SVYPLTSSVR GKDEPCSKII VRGKSMAGRA DDLFNLMNCL LQEVQFTDQQ RFKQFVSQSR ARMENRLRGS GHGIAAARMD AMLNIAGWMS
0801: EQMGGLSYLE FLHTLEKKVD EDWEGISSSL EEIRRSLLAR NGCIVNMTAD GKSLTNVEKS VAKFLDLLPE NPSGGLVTWD GRLPLRNEAI VIPTQVNYVG
0901: KAGNIYSTGY ELDGSAYVIS KHISNTWLWD RVRVSGGAYG GFCDFDSHSG VFSYLSYRDP NLLKTLDIYD GTGDFLRGLD VDQETLTKAI IGTIGDVDSY
1001: QLPDAKGYSS LLRHLLGVTD EERQRKREEI LTTSLKDFKD FAQAIDVVRD KGVAVAVASA EDIDAANNER SNFFEVKKAL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)