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AT3G19010.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 0.976
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:26572690 (2016): extracellular region plant-type cell wall
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: flavonol synthase activity, oxidoreductase activity, iron ion binding; INVOLVED IN: oxidation reduction, flavonoid biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Isopenicillin N synthase (InterPro:IPR002283), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G19000.1); Has 8891 Blast hits to 8841 proteins in 1001 species: Archae - 0; Bacteria - 1128; Metazoa - 121; Fungi - 1068; Plants - 4990; Viruses - 0; Other Eukaryotes - 1584 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G19010-MONOMEReggNOG:COG3491eggNOG:KOG0143EMBL:AP000735EMBL:BT002747EMBL:CP002686EnsemblPlants:AT3G19010
EnsemblPlants:AT3G19010.1entrez:821434ExpressionAtlas:Q9LJ65Gene3D:2.60.120.330GeneID:821434GO:GO:0005506GO:GO:0016491
Gramene:AT3G19010.1gramene_pathway:1.14.11.9gramene_pathway:PWY-5152gramene_pathway:PWY1F-823gramene_pathway:PWY1F-FLAVSYNhmmpanther:PTHR10209hmmpanther:PTHR10209:SF127
InterPro:IPR002283InterPro:IPR005123InterPro:IPR026992InterPro:IPR027443OMA:NTTRERYPfam:PF03171Pfam:PF14226
Pfscan:PS51471PhylomeDB:Q9LJ65PRINTS:PR00682PROSITE:PS51471Proteomes:UP000006548RefSeq:NP_566624.1SMR:Q9LJ65
STRING:3702.AT3G19010.1SUPFAM:SSF51197TAIR:AT3G19010UniGene:At.20707UniProt:Q9LJ65
Coordinates (TAIR10) chr3:-:6556306..6557862
Molecular Weight (calculated) 40698.20 Da
IEP (calculated) 5.11
GRAVY (calculated) -0.61
Length 349 amino acids
Sequence (TAIR10)
(BLAST)
001: MEDLDPTYIQ APEHRSDSNF IPNQPEEIPV IDLSRLDDPE DVQNVISEIG DACEKWGFFQ VLNHGVPSDA RQRVEKTVKM FFDLPMEEKI KVKRDDVNPV
101: GYHDGEHTKN VKDWKEVFDI YFKDPMVIPS TTDPEDEGLR LVYNKWPQSP SDFREACEVY ARHAEKLAFK LLELISLSLG LPKERFHDYF KEQMSFFRIN
201: RYPPCPRPDL ALGVGHHKDA DVISLLAQDD VGGLQVSRRS DGVWFPIRPV PNALVINIGN CMEIWTNDKY WSAEHRVVVN TTRERYSIPF FLLPSHDVEV
301: KPLEELVSPE NPPKYKGYKW GKFYVSRNRS DFRKLEIENI QIDDFKVKT
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)