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AT3G18690.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 1.000
ASURE: nucleus
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : MAP kinase substrate 1
Curator
Summary (TAIR10)
Encodes a nuclear-localized member of a plant specific gene family involved in mediating responses to pathogens. Interacts with WRKY transcriptional regulators.
Computational
Description (TAIR10)
MAP kinase substrate 1 (MKS1); CONTAINS InterPro DOMAIN/s: VQ (InterPro:IPR008889); BEST Arabidopsis thaliana protein match is: VQ motif-containing protein (TAIR:AT1G21326.1); Has 153 Blast hits to 153 proteins in 16 species: Archae - 0; Bacteria - 5; Metazoa - 0; Fungi - 1; Plants - 147; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
BioGrid:6733eggNOG:ENOG410IZ6VeggNOG:ENOG410YNIDEMBL:AB026654EMBL:AY084330EMBL:BT024603EMBL:CP002686
EnsemblPlants:AT3G18690EnsemblPlants:AT3G18690.1entrez:821400GeneID:821400Genevisible:Q8LGD5GO:GO:0005634GO:GO:0006952
GO:GO:0009870Gramene:AT3G18690.1hmmpanther:PTHR33143hmmpanther:PTHR33143:SF5HOGENOM:HOG000239140InParanoid:Q8LGD5IntAct:Q8LGD5
InterPro:IPR008889iPTMnet:Q8LGD5KEGG:ath:AT3G18690MINT:MINT-7232260OMA:YIPREPVPaxDb:Q8LGD5Pfam:PF05678
Pfam:Q8LGD5PhylomeDB:Q8LGD5PRIDE:Q8LGD5PRO:PR:Q8LGD5ProteinModelPortal:Q8LGD5Proteomes:UP000006548RefSeq:NP_566616.1
STRING:3702.AT3G18690.1TAIR:AT3G18690tair10-symbols:MKS1UniGene:At.6380UniGene:At.69640UniProt:Q8LGD5
Coordinates (TAIR10) chr3:-:6429755..6430423
Molecular Weight (calculated) 23582.80 Da
IEP (calculated) 6.51
GRAVY (calculated) -0.35
Length 222 amino acids
Sequence (TAIR10)
(BLAST)
001: MDPSEYFAGG NPSDQQNQKR QLQICGPRPS PLSVHKDSHK IKKPPKHPAP PPNRDQPPPY IPREPVVIYA VSPKVVHATA SEFMNVVQRL TGISSGVFLE
101: SGGGGDVSPA ARLASTENAS PRGGKEPAAR DETVEINTAM EEAAEFGGYA PGILSPSPAL LPTASTGIFS PMYHQGGMFS PAIPLGLFSP AGFMSPFRSP
201: GFTSLVASPT FADFFSHIWD QD
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)