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AT3G18680.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plastid 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Amino acid kinase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Amino acid kinase family protein; FUNCTIONS IN: uridylate kinase activity, UMP kinase activity; INVOLVED IN: cellular amino acid biosynthetic process, pyrimidine nucleotide biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aspartate/glutamate/uridylate kinase (InterPro:IPR001048), Uridylate kinase, bacteria (InterPro:IPR015963); BEST Arabidopsis thaliana protein match is: aspartate/glutamate/uridylate kinase family protein (TAIR:AT3G10030.1); Has 10647 Blast hits to 10647 proteins in 2814 species: Archae - 356; Bacteria - 8071; Metazoa - 2; Fungi - 40; Plants - 182; Viruses - 0; Other Eukaryotes - 1996 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G18680-MONOMEReggNOG:COG0528eggNOG:ENOG410IEXEEMBL:AB026654EMBL:AY050828EMBL:AY091161EMBL:CP002686
EnsemblPlants:AT3G18680EnsemblPlants:AT3G18680.1entrez:821399Gene3D:3.40.1160.10GeneID:821399GO:GO:0006221GO:GO:0009507
GO:GO:0033862Gramene:AT3G18680.1gramene_pathway:2.7.4.22gramene_pathway:PWY-5687HAMAP:MF_01220_Bhmmpanther:PTHR21499hmmpanther:PTHR21499:SF23
HOGENOM:HOG000047187IntAct:Q9LSA9InterPro:IPR001048InterPro:IPR011817InterPro:IPR015963KEGG:00240+2.7.4.22KEGG:ath:AT3G18680
KO:K09903OMA:RSRADYMPANTHER:PTHR21499:SF23Pfam:PF00696PhylomeDB:Q9LSA9ProMEX:Q9LSA9Proteomes:UP000006548
RefSeq:NP_188498.1SMR:Q9LSA9STRING:3702.AT3G18680.1SUPFAM:SSF53633TAIR:AT3G18680TIGRfam:TIGR02075TIGRFAMs:TIGR02075
UniGene:At.6380UniGene:At.69640unipathway:UPA00159UniProt:Q9LSA9
Coordinates (TAIR10) chr3:+:6427533..6429520
Molecular Weight (calculated) 36265.30 Da
IEP (calculated) 8.48
GRAVY (calculated) -0.06
Length 339 amino acids
Sequence (TAIR10)
(BLAST)
001: MAIPLPLTSC SPISTSSSIS RTSFVPLTLR NRTFFSNQNY SRRVLISCSS SLSSDNGSSP DSMNGNGNGN GSSLNGQSSF PRLPSFDGTS KPPLKWRRVL
101: LKVSGEALAG DEEQNIDPKV TMAIAREVAA VTRLGIEVAI VVGGGNIFRG STWAGCSGLD RSSADYIGML ATVMNAIFLQ ATMESIGIPT RVQTAFRMSE
201: VAEPYIRRRA IRHLEKGRVV IFAAGTGNPF FTTDTAAALR CAEINAEVVL KATNVDGVFD DDPKRNPNAR LLDSLTYQEV TSKDLSVMDM TAITLCQENN
301: IPVVVFNLSE PGNIAKAIKG ERVGTLIGGT WNSIVTTTS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)