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AT3G18220.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plasma membrane 0.880
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Phosphatidic acid phosphatase (PAP2) family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Phosphatidic acid phosphatase (PAP2) family protein; FUNCTIONS IN: catalytic activity, phosphatidate phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Phosphatidic acid phosphatase/chloroperoxidase, N-terminal (InterPro:IPR016118), Phosphatidic acid phosphatase type 2/haloperoxidase (InterPro:IPR000326); BEST Arabidopsis thaliana protein match is: lipid phosphate phosphatase 2 (TAIR:AT1G15080.1); Has 2090 Blast hits to 2085 proteins in 382 species: Archae - 5; Bacteria - 336; Metazoa - 902; Fungi - 401; Plants - 197; Viruses - 3; Other Eukaryotes - 246 (source: NCBI BLink).
Protein Annotations
EC:3.1.3.-eggNOG:COG0671eggNOG:KOG3030EMBL:AK229475EMBL:AP000414EMBL:AY087632EMBL:CP002686
EnsemblPlants:AT3G18220EnsemblPlants:AT3G18220.1entrez:821350Gene3D:1.20.144.10GeneID:821350Genevisible:Q0WNG6GO:GO:0005887
GO:GO:0006644GO:GO:0007165GO:GO:0008195GO:GO:0046839Gramene:AT3G18220.1gramene_pathway:3.1.3.4gramene_pathway:TRIGLSYN-PWY
hmmpanther:PTHR10165hmmpanther:PTHR10165:SF91HOGENOM:HOG000215098InParanoid:Q0WNG6InterPro:IPR000326InterPro:IPR028681KEGG:00051+3.1.3.-
KEGG:00332+3.1.3.-KEGG:00565+3.1.3.-KEGG:00600+3.1.3.-KEGG:00730+3.1.3.-KEGG:00740+3.1.3.-KEGG:00760+3.1.3.-KEGG:ath:AT3G18220
OMA:WRCQDSLPANTHER:PTHR10165:SF91PaxDb:Q0WNG6Pfam:PF01569Pfam:Q0WNG6PhylomeDB:Q0WNG6PRIDE:Q0WNG6
PRO:PR:Q0WNG6ProteinModelPortal:Q0WNG6Proteomes:UP000006548Reactome:R-ATH-2029485RefSeq:NP_566602.1SMART:SM00014STRING:3702.AT3G18220.1
SUPFAM:SSF48317TAIR:AT3G18220TMHMM:TMhelixUniGene:At.38588UniProt:Q0WNG6
Coordinates (TAIR10) chr3:+:6248355..6249799
Molecular Weight (calculated) 35103.60 Da
IEP (calculated) 8.29
GRAVY (calculated) 0.11
Length 308 amino acids
Sequence (TAIR10)
(BLAST)
001: MAKIMLGSHS VKSHGWKVAR EHLCDWLILV VLGLIDIVLN VIEPFHRYIG PDMLTDLTFP FYEDTIPMWA VPIICILVPI CIFIVYYYYR RDVYDLHHAI
101: LGIGFSCLVT GVTTDSIKDA VGRPRPNFFY RCFPNGKPKF HPDTKDVVCH GVKKIIKEGY KSFPSGHTSW SFAGLTFLAW YLSGKIKVFD RRGHVAKLCL
201: VFLPILISIL IGISRVDDYW HHWTDVFAGA IIGIFVASFS YLHFFPYPYD ENGWAPHAYF RMLAERSTGR ATTMTRTGSR GMLGNDVEPG NSASSPHDRH
301: RESTDSDF
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)