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AT3G17840.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plasma membrane 1.000
ASURE: plasma membrane
What is SUBAcon?
What is ASURE?
SUBAcon computations
Predictors External Curations
AmiGO : plasma membrane 15388970
AmiGO : plasma membrane 16618929
SwissProt : plasma membrane 16381842
TAIR : plasma membrane 17317660
TAIR : plasma membrane 15388970
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:28155257 (2017): extracellular region plant-type cell wall
  • PMID:26781341 (2016): plasma membrane
  • PMID:26572690 (2016): extracellular region plant-type cell wall
  • PMID:25641898 (2015): plasma membrane
  • PMID:22923678 (2012): plasma membrane
  • PMID:22318864 (2012): plasma membrane
  • PMID:22215637 (2012): plasma membrane
  • PMID:21433285 (2011): plasma membrane
  • PMID:20843791 (2010): plasma membrane
  • PMID:20374526 (2010): plasma membrane
  • PMID:17644812 (2007): plasma membrane
  • PMID:17317660 (2007): plasma membrane
  • PMID:16618929 (2006): plasma membrane
  • PMID:15308754 (2004): plasma membrane
  • PMID:14517339 (2003): plasma membrane
  • PMID:14506206 (2003): plasma membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : receptor-like kinase 902
Curator
Summary (TAIR10)
Encodes a receptor-like kinase found at the cell surface of various tissues. Its function remains unknown.
Computational
Description (TAIR10)
receptor-like kinase 902 (RLK902); FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat (InterPro:IPR001611), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: receptor-like kinase 1 (TAIR:AT1G48480.1); Has 143949 Blast hits to 109803 proteins in 3756 species: Archae - 98; Bacteria - 11788; Metazoa - 41712; Fungi - 7708; Plants - 66121; Viruses - 325; Other Eukaryotes - 16197 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G17840-MONOMERBioGrid:6386eggNOG:ENOG410IP1HeggNOG:ENOG410Y9HFEMBL:AB019230EMBL:AY086189EMBL:AY095994
EMBL:BT002283EMBL:CP002686EnsemblPlants:AT3G17840EnsemblPlants:AT3G17840.1entrez:821053ExpressionAtlas:Q9LVI6Gene3D:3.80.10.10
GeneID:821053Genevisible:Q9LVI6GO:GO:0004672GO:GO:0005524GO:GO:0005886GO:GO:0009506GO:GO:0016021
Gramene:AT3G17840.1hmmpanther:PTHR27008hmmpanther:PTHR27008:SF19HOGENOM:HOG000116554InParanoid:Q9LVI6IntAct:Q9LVI6InterPro:IPR000719
InterPro:IPR001611InterPro:IPR011009InterPro:IPR013210InterPro:IPR017441InterPro:IPR032675iPTMnet:Q9LVI6KEGG:ath:AT3G17840
ncoils:CoilOMA:KGRDLQMPaxDb:Q9LVI6Pfam:PF00069Pfam:PF08263Pfam:PF13855Pfam:Q9LVI6
Pfscan:PS50011PhylomeDB:Q9LVI6PRIDE:Q9LVI6PRO:PR:Q9LVI6PROSITE:PS00107PROSITE:PS50011ProteinModelPortal:Q9LVI6
Proteomes:UP000006548RefSeq:NP_566589.1scanprosite:PS00107SMR:Q9LVI6STRING:3702.AT3G17840.1SUPFAM:SSF52058SUPFAM:SSF56112
TAIR:AT3G17840tair10-symbols:RLK902TMHMM:TMhelixUniGene:At.38651UniProt:C0LGN3UniProt:Q9LVI6
Coordinates (TAIR10) chr3:+:6106092..6108430
Molecular Weight (calculated) 70409.80 Da
IEP (calculated) 6.53
GRAVY (calculated) -0.07
Length 647 amino acids
Sequence (TAIR10)
(BLAST)
001: MRLFFTPSMS NLSIFFSILL LSLPLPSIGD LAADKSALLS FRSAVGGRTL LWDVKQTSPC NWTGVLCDGG RVTALRLPGE TLSGHIPEGI FGNLTQLRTL
101: SLRLNGLTGS LPLDLGSCSD LRRLYLQGNR FSGEIPEVLF SLSNLVRLNL AENEFSGEIS SGFKNLTRLK TLYLENNKLS GSLLDLDLSL DQFNVSNNLL
201: NGSIPKSLQK FDSDSFVGTS LCGKPLVVCS NEGTVPSQPI SVGNIPGTVE GSEEKKKRKK LSGGAIAGIV IGCVVGLSLI VMILMVLFRK KGNERTRAID
301: LATIKHHEVE IPGEKAAVEA PENRSYVNEY SPSAVKAVEV NSSGMKKLVF FGNATKVFDL EDLLRASAEV LGKGTFGTAY KAVLDAVTLV AVKRLKDVTM
401: ADREFKEKIE VVGAMDHENL VPLRAYYYSG DEKLLVYDFM PMGSLSALLH GNKGAGRPPL NWEVRSGIAL GAARGLDYLH SQDPLSSHGN VKSSNILLTN
501: SHDARVSDFG LAQLVSASST TPNRATGYRA PEVTDPRRVS QKADVYSFGV VLLELLTGKA PSNSVMNEEG MDLARWVHSV AREEWRNEVF DSELMSIETV
601: VSVEEEMAEM LQLGIDCTEQ HPDKRPVMVE VVRRIQELRQ SGADRVG
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)