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AT3G17680.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Kinase interacting (KIP1-like) family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Kinase interacting (KIP1-like) family protein; CONTAINS InterPro DOMAIN/s: KIP1-like (InterPro:IPR011684); BEST Arabidopsis thaliana protein match is: Kinase interacting (KIP1-like) family protein (TAIR:AT1G48405.1); Has 122 Blast hits to 120 proteins in 22 species: Archae - 0; Bacteria - 2; Metazoa - 6; Fungi - 0; Plants - 100; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink).
Protein Annotations
EMBL:AK117759EMBL:BT024782EMBL:CP002686EnsemblPlants:AT3G17680
EnsemblPlants:AT3G17680.1entrez:821035ExpressionAtlas:Q8GYA7GeneID:821035
GO:GO:0016301Gramene:AT3G17680.1hmmpanther:PTHR32258hmmpanther:PTHR32258:SF3
InterPro:IPR011684ncoils:CoilPfscan:PS51774PROSITE:PS51774
Proteomes:UP000006548RefSeq:NP_188395.2TAIR:AT3G17680UniGene:At.38679
UniProt:Q8GYA7
Coordinates (TAIR10) chr3:-:6043138..6044267
Molecular Weight (calculated) 35567.50 Da
IEP (calculated) 5.71
GRAVY (calculated) -0.50
Length 313 amino acids
Sequence (TAIR10)
(BLAST)
001: MKNKASMEAP QLPSLSDLEA RMQILRESGF QESQGDDDTF AQRAEWFYQG RPLLLSLCLD LYNGYVTLLG RSSHQTRLKP TTSLPNQLLQ DDDDCISDID
101: SVSEVSSEVE STLSFQQMKD PTAVSEKVDE LVSQLVTASL DKEILKHELL HKDQQFHEAS KTIELLKKFV MLLEMEKEVA VEENANLGYK LTSLLEENRE
201: LATEALFMKN EAVGLARCVL KMRDDHFHKV CILQNRIYSL QASRNSEPVS DKVSYGCFGL DKHKTKKKKE NKTEEKKPGF KWLKKLNTIN LFTKCSLNPS
301: AAAPSCCTFD LPY
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)