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AT3G17410.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plasma membrane 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:26781341 (2016): plasma membrane
  • PMID:25900983 (2015): plant-type vacuole plant-type vacuole membrane
  • PMID:25641898 (2015): plasma membrane
  • PMID:22318864 (2012): plasma membrane
  • PMID:22215637 (2012): plasma membrane
  • PMID:20843791 (2010): plasma membrane
  • PMID:17644812 (2007): plasma membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Protein kinase superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G48210.2); Has 112711 Blast hits to 111551 proteins in 4660 species: Archae - 117; Bacteria - 13367; Metazoa - 41567; Fungi - 8923; Plants - 32528; Viruses - 331; Other Eukaryotes - 15878 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G17410-MONOMEReggNOG:COG0515eggNOG:KOG1187EMBL:AB022216EMBL:AY070413EMBL:AY096595EMBL:CP002686
EnsemblPlants:AT3G17410EnsemblPlants:AT3G17410.1entrez:821005GeneID:821005GO:GO:0004674GO:GO:0005524GO:GO:0005886
Gramene:AT3G17410.1hmmpanther:PTHR27001hmmpanther:PTHR27001:SF177HOGENOM:HOG000116550IntAct:Q9LUT0InterPro:IPR000719InterPro:IPR001245
InterPro:IPR008271InterPro:IPR011009InterPro:IPR017441KEGG:ath:AT3G17410OMA:HASEKAPPfam:PF07714Pfscan:PS50011
PhylomeDB:Q9LUT0PROSITE:PS00107PROSITE:PS00108PROSITE:PS50011Proteomes:UP000006548Reactome:R-ATH-450302Reactome:R-ATH-450321
RefSeq:NP_188367.2scanprosite:PS00107scanprosite:PS00108SMART:SM00220SMR:Q9LUT0STRING:3702.AT3G17410.1SUPFAM:SSF56112
TAIR:AT3G17410UniGene:At.26936UniProt:Q9LUT0
Coordinates (TAIR10) chr3:+:5956601..5958882
Molecular Weight (calculated) 39564.40 Da
IEP (calculated) 9.06
GRAVY (calculated) -0.30
Length 364 amino acids
Sequence (TAIR10)
(BLAST)
001: MGCFGCCGGG EDFRRVSETG PKPVHNTGGY NGGHHQRADP PKNLPVIQMQ PISVAAIPAD ELRDITDNYG SKSLIGEGSY GRVFYGILKS GKAAAIKKLD
101: SSKQPDQEFL AQVSMVSRLR QENVVALLGY CVDGPLRVLA YEYAPNGSLH DILHGRKGVK GAQPGPVLSW HQRVKIAVGA ARGLEYLHEK ANPHVIHRDI
201: KSSNVLLFDD DVAKIADFDL SNQAPDMAAR LHSTRVLGTF GYHAPEYAMT GTLSTKSDVY SFGVVLLELL TGRKPVDHTL PRGQQSVVTW ATPKLSEDKV
301: KQCVDARLNG EYPPKAVAKL AAVAALCVQY EADFRPNMSI VVKALQPLLN PPRSAPQTPH RNPY
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)