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AT3G17250.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
mitochondrion 0.991
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Protein phosphatase 2C family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: protein amino acid dephosphorylation; LOCATED IN: protein serine/threonine phosphatase complex; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT1G48040.1); Has 6600 Blast hits to 6571 proteins in 473 species: Archae - 12; Bacteria - 378; Metazoa - 1628; Fungi - 712; Plants - 2605; Viruses - 7; Other Eukaryotes - 1258 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G17250-MONOMERBioGrid:6319EC:3.1.3.16eggNOG:COG0631eggNOG:KOG0698EMBL:AB022216EMBL:AK220861
EMBL:AK228860EMBL:CP002686EnsemblPlants:AT3G17250EnsemblPlants:AT3G17250.1entrez:820986Gene3D:3.60.40.10GeneID:820986
Genevisible:Q9LUU7GO:GO:0004722GO:GO:0046872Gramene:AT3G17250.1hmmpanther:PTHR13832hmmpanther:PTHR13832:SF316HOGENOM:HOG000233896
InParanoid:Q9LUU7IntAct:Q9LUU7InterPro:IPR000222InterPro:IPR001932InterPro:IPR015655KEGG:ath:AT3G17250KO:K14803
MINT:MINT-8390632OMA:RIHDSICPANTHER:PTHR13832PaxDb:Q9LUU7Pfam:PF00481Pfam:Q9LUU7Pfscan:PS51746
PhylomeDB:Q9LUU7PRIDE:Q9LUU7PRO:PR:Q9LUU7PROSITE:PS01032PROSITE:PS51746ProteinModelPortal:Q9LUU7Proteomes:UP000006548
Reactome:R-ATH-70895RefSeq:NP_188351.2scanprosite:PS01032SMART:SM00332SMR:Q9LUU7STRING:3702.AT3G17250.1SUPFAM:SSF81606
TAIR:AT3G17250UniGene:At.38757UniProt:Q9LUU7
Coordinates (TAIR10) chr3:-:5892875..5894426
Molecular Weight (calculated) 47601.60 Da
IEP (calculated) 4.84
GRAVY (calculated) -0.19
Length 422 amino acids
Sequence (TAIR10)
(BLAST)
001: MRTSKASVTQ TWLLYTQLCL WKDLIIRYVR QIIRRAKSML FSQNMVADSA EISVIDVKSH LSVAKDPSNF QIAEIRIHDS ICIDIPSSEE TPLLESIKSC
101: SATTIEEHVT EFVPNISSGS YADKGDYREY MEDEHICIDD LSDHLGSSFY RFPVPMAFYG VFDGHGGSDA SQYIKENAMS LFFEDAVFRQ SPSVVDSLFL
201: KELETSHREA YRLADLAMED ERIVSSSCGT TALTALVIGR HLMVANVGDC RAVLCRKGKA VDMSFDHKST FEPERRRVED LGGYFEGEYL YGDLAVTRAL
301: GDWSIKRFSP LGESLSPLIS DPDIQQMILT EEDEFLIMGC DGVWDVMTSQ YAVTFVRQGL RRHGDPRRCA MELGREALRL DSSDNVTVVV ICFSSSPAPQ
401: RRRIRFCVSD EARARLQTML EG
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)