AT3G17020.1::SUBA5

AT3G17020.1

Subcellular Consensus
(Prediction and Experimental)

min:

:max

SUBAcon:
cytosol 0.500
plasma membrane 0.500
ASURE: cytosol,plasma membrane
What is SUBAcon?

Predictors

External Curations

AmiGO : plasma membrane 17317660
AmiGO : plasma membrane 17644812
TAIR : plasma membrane 17317660

Experimental Localisations and PPI

FP	MS/MS	PPI
	PMID:31615849 (2019): plastid plastid thylakoid PMID:31520498 (2020): mitochondrion PMID:30447334 (2019): plasma membrane PMID:26781341 (2016): plasma membrane PMID:26572690 (2016): extracellular region plant-type cell wall PMID:25900983 (2015): Golgi trans-Golgi network PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body PMID:23673981 (2013): plastid plastid stroma plastoglobules PMID:22923678 (2012): plasma membrane PMID:22215637 (2012): plasma membrane PMID:19334764 (2009): plasma membrane PMID:17644812 (2007): plasma membrane PMID:17317660 (2007): plasma membrane	PMID:23615222 (2013): AT1G56070.1:None: PMID:20706207 (2010): AT5G65420.1:None: PMID:20706207 (2010): AT5G20920.1:None: PMID:20706207 (2010): AT2G27970.1:None: PMID:20706207 (2010): AT1G14810.1:None: PMID:17426018 (2007): AT5G10440.1:None: PMID:17426018 (2007): AT2G28000.1:None: PMID:17426018 (2007): AT2G20580.1:None: PMID:17426018 (2007): AT5G40460.1:None: PMID:17426018 (2007): AT2G27970.1:None: PMID:17426018 (2007): AT1G64520.1:None: PMID:17426018 (2007): AT3G49240.1:None: PMID:17426018 (2007): AT1G23190.1:None: PMID:17426018 (2007): AT5G65420.1:None: PMID:17426018 (2007): AT3G19150.1:None:

SUBAcon links
AGI-AGI relationships

Coexpression	PPI
AT3G46000.1 cytosol [7.25] AT5G37780.1 nucleus [6.34] AT2G02760.1 cytosol [6.27] AT3G03100.1 mitochondrion [6.25] AT5G04750.1 mitochondrion [6.01] AT5G10860.1 mitochondrion [5.93] AT3G12290.1 cytosol [5.91] AT4G14716.1 cytosol [5.85] AT1G68300.1 cytosol [5.77] AT3G58680.1 nucleus [5.73]	AT1G23190.1 cytosol AT1G56070.1 cytosol AT5G20920.1 cytosol AT3G49240.1 mitochondrion AT2G27970.1 nucleus AT3G19150.1 nucleus AT5G10440.1 nucleus AT5G40460.1 nucleus AT5G65420.1 nucleus AT1G64520.1 cytosol, nucleus AT2G20580.1 cytosol, nucleus AT1G14810.1 plastid AT2G28000.1 plastid

Description (TAIR10)

protein_coding : Adenine nucleotide alpha hydrolases-like superfamily protein

Curator
Summary (TAIR10)

Computational
Description (TAIR10)

Adenine nucleotide alpha hydrolases-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to cold, response to stress; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Universal stress protein A (InterPro:IPR006015); BEST Arabidopsis thaliana protein match is: Adenine nucleotide alpha hydrolases-like superfamily protein (TAIR:AT3G03270.2); Has 3326 Blast hits to 3271 proteins in 769 species: Archae - 372; Bacteria - 2020; Metazoa - 115; Fungi - 79; Plants - 685; Viruses - 0; Other Eukaryotes - 55 (source: NCBI BLink).

Protein Annotations

eggNOG:ENOG410IWHR	eggNOG:ENOG410ZKU6	EMBL:AB026636	EMBL:AF378888
EMBL:AY050480	EMBL:CP002686	EnsemblPlants:AT3G17020	EnsemblPlants:AT3G17020.1
entrez:820958	Gene3D:3.40.50.620	GeneID:820958	GO:GO:0005886
GO:GO:0009409	GO:GO:0016787	Gramene:AT3G17020.1	hmmpanther:PTHR31964
hmmpanther:PTHR31964:SF23	HOGENOM:HOG000238898	IntAct:Q9LSP5	InterPro:IPR006015
InterPro:IPR006016	InterPro:IPR014729	KEGG:ath:AT3G17020	OMA:AERWVGA
Pfam:PF00582	PhylomeDB:Q9LSP5	PRINTS:PR01438	Proteomes:UP000006548
RefSeq:NP_566564.1	STRING:3702.AT3G17020.1	SUPFAM:SSF52402	TAIR:AT3G17020
UniGene:At.24032	UniProt:Q9LSP5

Coordinates (TAIR10)

chr3:-:5802728..5804063

Molecular Weight (calculated)

17776.70 Da

IEP (calculated)

6.93

GRAVY (calculated)

0.06

Length

163 amino acids

Sequence (TAIR10)
(BLAST)

001: MAESGGRRIG VAVDFSDCSK KALSWAIDNV VRDGDHLILI TIAHDMNYEE GEMQLWETVG SPFIPMSEFS DAAVMKKYAL KPDAETLDIV NTAARKKTIT
101: VVMKIYWGDP REKICAAAEQ IPLSSLVMGN RGLGGLKRMI MGSVSNHVVN NVACPVTVVK AHI