AT3G16700.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:mitochondrion 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Fumarylacetoacetate (FAA) hydrolase family | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Fumarylacetoacetate (FAA) hydrolase family; FUNCTIONS IN: copper ion binding, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Fumarylacetoacetase, C-terminal-like (InterPro:IPR002529), Fumarylacetoacetase, C-terminal-related (InterPro:IPR011234); BEST Arabidopsis thaliana protein match is: Fumarylacetoacetate (FAA) hydrolase family (TAIR:AT4G15940.1); Has 10996 Blast hits to 10845 proteins in 1927 species: Archae - 263; Bacteria - 6882; Metazoa - 304; Fungi - 435; Plants - 73; Viruses - 0; Other Eukaryotes - 3039 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:5687809..5689664 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 24418.00 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.93 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.04 | ||||||||||||||||||||||||||||||||
| Length | 224 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MATSMIQRLF KQGTKIVGVG LNYASHAKEL GNALPKDPIV FLKPTSSYLE NGGTIEIPHP LDSLHHEVEL AVVIGQKARD VPERLAMNYI GGYALALDMT 101: ARELQVSAMA SGLPCTLAKG QDTFTPISSV LPKAMVLDPN NLELWLKVDD ETRQKGWTKD MIFKVPYLIS YISSVMTLFK GDVILTGTPE GIGPVKIGQK 201: ITAGITGLSE VQFDVGRRLK PLLR |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)