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AT3G16690.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
extracellular 0.576
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Nodulin MtN3 family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Nodulin MtN3 family protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, integral to membrane, membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: MtN3/saliva-related transmembrane protein, conserved region (InterPro:IPR018169), RAG1-activating protein 1 homologue (InterPro:IPR018179), RAG1-activating protein-1-related (InterPro:IPR004316); BEST Arabidopsis thaliana protein match is: Nodulin MtN3 family protein (TAIR:AT4G15920.1); Has 956 Blast hits to 931 proteins in 112 species: Archae - 0; Bacteria - 0; Metazoa - 194; Fungi - 0; Plants - 632; Viruses - 0; Other Eukaryotes - 130 (source: NCBI BLink).
Protein Annotations
BioGrid:6255eggNOG:ENOG4111M4ReggNOG:KOG1623EMBL:AB022217EMBL:AK222159EMBL:BT010528EMBL:CP002686
EnsemblPlants:AT3G16690EnsemblPlants:AT3G16690.1entrez:820921GeneID:820921Genevisible:Q9LUR4GO:GO:0005353GO:GO:0005355
GO:GO:0005887GO:GO:0006970GO:GO:0006995GO:GO:0008515GO:GO:0009409GO:GO:0009705GO:GO:0009744
GO:GO:0009749GO:GO:0009750GO:GO:0015770GO:GO:0016021GO:GO:0051119GO:GO:0051260GO:GO:1902334
GO:GO:1904659Gramene:AT3G16690.1hmmpanther:PTHR10791hmmpanther:PTHR10791:SF29HOGENOM:HOG000237944InParanoid:Q9LUR4IntAct:Q9LUR4
InterPro:IPR004316KEGG:ath:AT3G16690KO:K15382OMA:GFICATLPaxDb:Q9LUR4Pfam:PF03083Pfam:Q9LUR4
PhylomeDB:Q9LUR4PRIDE:Q9LUR4PRO:PR:Q9LUR4ProteinModelPortal:Q9LUR4Proteomes:UP000006548RefSeq:NP_188291.2STRING:3702.AT3G16690.1
TAIR:AT3G16690tair10-symbols:AtSWEET16tair10-symbols:SWEET16TMHMM:TMhelixUniGene:At.27835UniProt:Q9LUR4
Coordinates (TAIR10) chr3:-:5684563..5686425
Molecular Weight (calculated) 25745.90 Da
IEP (calculated) 4.84
GRAVY (calculated) 0.81
Length 230 amino acids
Sequence (TAIR10)
(BLAST)
001: MADLSFYVGV IGNVISVLVF LSPVETFWRI VQRRSTEEYE CFPYICTLMS SSLWTYYGIV TPGEYLVSTV NGFGALAESI YVLIFLFFVP KSRFLKTVVV
101: VLALNVCFPV IAIAGTRTLF GDANSRSSSM GFICATLNII MYGSPLSAIK TVVTTRSVQF MPFWLSFFLF LNGAIWGVYA LLLHDMFLLV PNGMGFFLGI
201: MQLLIYAYYR NAEPIVEDEE GLIPNQPLLA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)