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AT3G16620.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
mitochondrion 0.740
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:22923678 (2012): plastid
  • PMID:21896887 (2011): mitochondrion mitochondrial envelope mitochondrial outer membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : translocon outer complex protein 120
Curator
Summary (TAIR10)
component of TOC complex, plastid protein import machinery.
Computational
Description (TAIR10)
translocon outer complex protein 120 (TOC120); FUNCTIONS IN: GTP binding; INVOLVED IN: protein targeting to chloroplast; LOCATED IN: chloroplast outer membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Chloroplast protein import component Toc86/159 (InterPro:IPR005690), AIG1 (InterPro:IPR006703); BEST Arabidopsis thaliana protein match is: multimeric translocon complex in the outer envelope membrane 132 (TAIR:AT2G16640.1); Has 2198 Blast hits to 1948 proteins in 385 species: Archae - 12; Bacteria - 407; Metazoa - 712; Fungi - 212; Plants - 332; Viruses - 5; Other Eukaryotes - 518 (source: NCBI BLink).
Protein Annotations
BioGrid:6247EC:3.6.5.-eggNOG:ENOG410IJABeggNOG:ENOG410XR0MEMBL:AB022217EMBL:AK229133EMBL:AY587019
EMBL:CP002686EnsemblPlants:AT3G16620EnsemblPlants:AT3G16620.1entrez:820913Gene3D:3.40.50.300GeneID:820913Genevisible:Q9LUS2
GO:GO:0005525GO:GO:0009536GO:GO:0009707GO:GO:0016021GO:GO:0016817GO:GO:0045036GO:GO:0046872
Gramene:AT3G16620.1hmmpanther:PTHR10903hmmpanther:PTHR10903:SF47HOGENOM:HOG000243570InParanoid:Q9LUS2IntAct:Q9LUS2InterPro:IPR005690
InterPro:IPR006703InterPro:IPR024283InterPro:IPR027417iPTMnet:Q9LUS2KEGG:ath:AT3G16620OMA:PNGYSENPaxDb:Q9LUS2
Pfam:PF04548Pfam:PF11886Pfam:Q9LUS2Pfscan:PS51720PhylomeDB:Q9LUS2PRIDE:Q9LUS2PRO:PR:Q9LUS2
PROSITE:PS51720ProteinModelPortal:Q9LUS2Proteomes:UP000006548RefSeq:NP_188284.1SMR:Q9LUS2STRING:3702.AT3G16620.1SUPFAM:SSF52540
TAIR:AT3G16620tair10-symbols:ATTOC120tair10-symbols:TOC120TIGRfam:TIGR00993TIGRFAMs:TIGR00993UniGene:At.38870UniProt:Q9LUS2
Coordinates (TAIR10) chr3:-:5658469..5661738
Molecular Weight (calculated) 119924.00 Da
IEP (calculated) 4.73
GRAVY (calculated) -0.58
Length 1089 amino acids
Sequence (TAIR10)
(BLAST)
0001: MGDGAEIVTR LYGDEKKLAE DGRISELVGS DEVKDNEEEV FEEAIGSQEG LKPESLKTDV LQEDFPLASN DEVCDLEETS RNERGVENLK VNYSEIGESH
0101: GEVNEQCITT KEADSDLVTL KMNDYDHGEV ADADISYGKM ASSLDVVENS EKATSNLATE DVNLENGNTH SSSENGVVSP DENKELVAEV ISVSACSVET
0201: GSNGIDDEKW EEEIDVSAGM VTEQRNGKTG AEFNSVKIVS GDKSLNDSIE VAAGTLSPLE KSSSEEKGET ESQNSNGGHD IQSNKEIVKQ QDSSVNIGPE
0301: IKESQHMERE SEVLSSVSPT ESRSDTAALP PARPAGLGRA APLLEPAPRV TQQPRVNGNV SHNQPQQAED STTAETDEHD ETREKLQFIR VKFLRLSHRL
0401: GQTPHNVVVA QVLYRLGLAE QLRGRNGSRV GAFSFDRASA MAEQLEAAAQ DPLDFSCTIM VLGKSGVGKS ATINSIFDEL KISTDAFQVG TKKVQDIEGF
0501: VQGIKVRVID TPGLLPSWSD QHKNEKILKS VRAFIKKSPP DIVLYLDRLD MQSRDSGDMP LLRTITDVFG PSIWFNAIVG LTHAASAPPD GPNGTASSYD
0601: MFVTQRSHVI QQAIRQAAGD MRLMNPVSLV ENHSACRTNR AGQRVLPNGQ VWKPHLLLLS FASKILAEAN ALLKLQDNIP GGQFATRSKA PPLPLLLSSL
0701: LQSRPQAKLP EQQYDDEDDE DDLDESSDSE EESEYDELPP FKRLTKAEMT KLSKSQKKEY LDEMEYREKL FMKRQMKEER KRRKLLKKFA AEIKDMPNGY
0801: SENVEEERSE PASVPVPMPD LSLPASFDSD NPTHRYRYLD TSNQWLVRPV LETHGWDHDI GYEGVNAERL FVVKDKIPVS FSGQVTKDKK DAHVQLELAS
0901: SVKHGEGRST SLGFDMQNAG KELAYTIRSE TRFNKFRKNK AAAGLSVTLL GDSVSAGLKV EDKLIANKRF RMVMSGGAMT SRGDVAYGGT LEAQFRDKDY
1001: PLGRFLSTLG LSVMDWHGDL AIGGNIQSQV PIGRSSNLIA RANLNNRGAG QVSIRVNSSE QLQLAVVALV PLFKKLLTYY SPEQMQYGH
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)