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AT3G16175.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
peroxisome 0.962
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Thioesterase superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Thioesterase superfamily protein; CONTAINS InterPro DOMAIN/s: Thioesterase superfamily (InterPro:IPR006683); BEST Arabidopsis thaliana protein match is: Thioesterase superfamily protein (TAIR:AT1G52191.1); Has 298 Blast hits to 297 proteins in 61 species: Archae - 0; Bacteria - 6; Metazoa - 132; Fungi - 4; Plants - 150; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).
Protein Annotations
eggNOG:COG2050eggNOG:KOG3328EMBL:AY052654EMBL:AY098959EMBL:CP002686EnsemblPlants:AT3G16175EnsemblPlants:AT3G16175.1
entrez:820863Gene3D:3.10.129.10GeneID:820863Gramene:AT3G16175.1hmmpanther:PTHR21660HOGENOM:HOG000170540InterPro:IPR006683
InterPro:IPR029069KEGG:ath:AT3G16175OMA:GRQWMTAPfam:PF03061PhylomeDB:Q940V5Proteomes:UP000006548Reactome:R-ATH-75105
RefSeq:NP_566538.1SMR:Q940V5STRING:3702.AT3G16175.1SUPFAM:SSF54637TAIR:AT3G16175UniGene:At.26494UniGene:At.71147
UniProt:Q940V5
Coordinates (TAIR10) chr3:+:5480497..5481208
Molecular Weight (calculated) 16705.10 Da
IEP (calculated) 5.99
GRAVY (calculated) 0.16
Length 157 amino acids
Sequence (TAIR10)
(BLAST)
001: MVDPTIHNTT TYLEEIAKGN GQTEFEILIL KGLELIHVGK GILRCKLLVT DHVVGEDGSW NAGVITAVMD SIGASAVYSS GGGLHISVDL NSSFYSTAKI
101: HETVEIEARV NGSNGGLKSA VIEIRRETSG EIIATGRLWM APLSVKAIQN VSTLSKL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)