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AT3G15810.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Protein of unknown function (DUF567)
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Protein of unknown function (DUF567); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF567 (InterPro:IPR007612); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF567) (TAIR:AT1G80120.1); Has 436 Blast hits to 435 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 7; Plants - 429; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
DNASU:820824eggNOG:ENOG410IUDKeggNOG:ENOG410YKW3EMBL:AB017071EMBL:AY063868EMBL:AY086466EMBL:AY091222
EMBL:CP002686EnsemblPlants:AT3G15810EnsemblPlants:AT3G15810.1entrez:820824GeneID:820824Genevisible:Q9LVZ8Gramene:AT3G15810.1
hmmpanther:PTHR31087hmmpanther:PTHR31087:SF2HOGENOM:HOG000238319InParanoid:Q9LVZ8InterPro:IPR007612InterPro:IPR025659KEGG:ath:AT3G15810
OMA:FTLEIKPPaxDb:Q9LVZ8Pfam:PF04525Pfam:Q9LVZ8PhylomeDB:Q9LVZ8PRIDE:Q9LVZ8PRO:PR:Q9LVZ8
ProteinModelPortal:Q9LVZ8Proteomes:UP000006548RefSeq:NP_566526.1SMR:Q9LVZ8STRING:3702.AT3G15810.1SUPFAM:SSF54518TAIR:AT3G15810
UniGene:At.27403UniProt:Q9LVZ8
Coordinates (TAIR10) chr3:-:5348054..5349178
Molecular Weight (calculated) 24818.60 Da
IEP (calculated) 4.50
GRAVY (calculated) -0.36
Length 220 amino acids
Sequence (TAIR10)
(BLAST)
001: MELVEETIPK EGKKMGERIV VDKAYLYQED KPLTVCKTSL FYTGDGFAAY DCRGDIIFRV DSYGPDTRDN DEIVLMDATG KCLLTVKRKR PTLHQRWEGF
101: LGERSEGQKP IFSVRRSSII GRCTMEVEVY DGTGEEYIID GDFSQRSCLI YDTKKCTVAE IKRKVDASTN VMLGRDVFTL EIKPGFDGAF AMGLVVVLDQ
201: INGDDPVEIG DEQVHPFVED
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)