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AT3G15530.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plasma membrane 0.498
vacuole 0.316
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Methyltransferase type 11 (InterPro:IPR013216); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT5G54400.1); Has 3407 Blast hits to 3407 proteins in 1171 species: Archae - 144; Bacteria - 2817; Metazoa - 15; Fungi - 148; Plants - 101; Viruses - 0; Other Eukaryotes - 182 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IKA2eggNOG:ENOG4111P8XEMBL:AB022218EMBL:AC024081EMBL:AY085472EMBL:BT000456EMBL:BT002077
EMBL:CP002686EnsemblPlants:AT3G15530EnsemblPlants:AT3G15530.1EnsemblPlants:AT3G15530.2entrez:820792Gene3D:3.40.50.150GeneID:820792
GO:GO:0008168GO:GO:0016021Gramene:AT3G15530.1Gramene:AT3G15530.2hmmpanther:PTHR10108hmmpanther:PTHR10108:SF754HOGENOM:HOG000152989
InterPro:IPR013216InterPro:IPR029063KEGG:ath:AT3G15530OMA:IYFDQICPfam:PF08241PhylomeDB:Q9LDW4Proteomes:UP000006548
RefSeq:NP_566517.1RefSeq:NP_850590.1SMR:Q9LDW4STRING:3702.AT3G15530.1SUPFAM:SSF53335TAIR:AT3G15530TMHMM:TMhelix
UniGene:At.27561UniGene:At.75615UniProt:Q9LDW4
Coordinates (TAIR10) chr3:-:5253253..5254193
Molecular Weight (calculated) 32090.10 Da
IEP (calculated) 8.57
GRAVY (calculated) 0.24
Length 288 amino acids
Sequence (TAIR10)
(BLAST)
001: MGKTTGNRDW TQIYAIYGIE QWQTLVFLLF HAFFFSLLSL LFLIYFDQIC FFLDSFFLSG AARLAAGFTG AVTALSAVCL LFAAANFVYS DVPLQYEMAQ
101: RMVSSVGDWS CVKTALDLGC GRGILLNAVA TQLKKTGSSG RVVGLDRSKR TTLSTLRTAK LEGVQEYVTC REGDVKTLPF GDNYFDVVVS SVFVHTVGKE
201: HGQKSVEAAA ERMRVLGEIV RVVKPGGLCV VWDLLHVPEY VRRLQELKME DIRVSERVTA FMAGSHIVSF RKPSELVAGP REVRLDWR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)