AT3G15530.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.705 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Methyltransferase type 11 (InterPro:IPR013216); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT5G54400.1); Has 3407 Blast hits to 3407 proteins in 1171 species: Archae - 144; Bacteria - 2817; Metazoa - 15; Fungi - 148; Plants - 101; Viruses - 0; Other Eukaryotes - 182 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:5253253..5254193 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 32090.10 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.57 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.24 | ||||||||||||||||||||||||||||||||||||||||
| Length | 288 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MGKTTGNRDW TQIYAIYGIE QWQTLVFLLF HAFFFSLLSL LFLIYFDQIC FFLDSFFLSG AARLAAGFTG AVTALSAVCL LFAAANFVYS DVPLQYEMAQ 101: RMVSSVGDWS CVKTALDLGC GRGILLNAVA TQLKKTGSSG RVVGLDRSKR TTLSTLRTAK LEGVQEYVTC REGDVKTLPF GDNYFDVVVS SVFVHTVGKE 201: HGQKSVEAAA ERMRVLGEIV RVVKPGGLCV VWDLLHVPEY VRRLQELKME DIRVSERVTA FMAGSHIVSF RKPSELVAGP REVRLDWR |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)