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AT3G15354.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data
Description (TAIR10) protein_coding : SPA1-related 3
Curator
Summary (TAIR10)
Encodes a member of the SPA (suppressor of phyA-105) protein family (SPA1-SPA4). SPA proteins contain an N-terminal serine/threonine kinase-like motif followed by a coiled-coil structure and a C-terminal WD-repeat domain. SPA proteins function redundantly in suppressing photomorphogenesis in dark- and light-grown seedlings. SPA3 (and SPA4) predominantly regulates elongation growth in adult plants.
Computational
Description (TAIR10)
SPA1-related 3 (SPA3); FUNCTIONS IN: protein binding, signal transducer activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: CUL4 RING ubiquitin ligase complex, heterotrimeric G-protein complex; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), Serine/threonine-protein kinase domain (InterPro:IPR002290), WD40 repeat (InterPro:IPR001680), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), WD40 repeat-like-containing domain (InterPro:IPR011046), Protein kinase, catalytic domain (InterPro:IPR000719), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: SPA1-related 4 (TAIR:AT1G53090.2); Has 21839 Blast hits to 15304 proteins in 547 species: Archae - 20; Bacteria - 4030; Metazoa - 7396; Fungi - 4798; Plants - 2703; Viruses - 2; Other Eukaryotes - 2890 (source: NCBI BLink).
Protein Annotations
BioGrid:6101eggNOG:ENOG410XS0BeggNOG:KOG1033EMBL:AP000413EMBL:CP002686EMBL:HQ228994EMBL:HQ228995
EnsemblPlants:AT3G15354EnsemblPlants:AT3G15354.1entrez:820767Gene3D:2.130.10.10GeneID:820767GO:GO:0004672GO:GO:0005524
GO:GO:0005634GO:GO:0009585GO:GO:0042802Gramene:AT3G15354.1HOGENOM:HOG000029775InParanoid:Q9LJR3IntAct:Q9LJR3
InterPro:IPR000719InterPro:IPR001680InterPro:IPR011009InterPro:IPR015943InterPro:IPR017986InterPro:IPR019775InterPro:IPR020472
iPTMnet:Q9LJR3KEGG:ath:AT3G15354ncoils:CoilPaxDb:Q9LJR3Pfam:PF00069Pfam:PF00400Pfam:Q9LJR3
Pfscan:PS50011Pfscan:PS50082Pfscan:PS50294PhylomeDB:Q9LJR3PRINTS:PR00320PRO:PR:Q9LJR3PROSITE:PS00678
PROSITE:PS50011PROSITE:PS50082PROSITE:PS50294ProteinModelPortal:Q9LJR3Proteomes:UP000006548Reactome:R-ATH-349425RefSeq:NP_683567.1
scanprosite:PS00678SMART:SM00220SMART:SM00320SMR:Q9LJR3STRING:3702.AT3G15354.1SUPFAM:SSF50978SUPFAM:SSF56112
TAIR:AT3G15354tair10-symbols:SPA3UniGene:At.1578UniGene:At.71086UniProt:Q9LJR3
Coordinates (TAIR10) chr3:-:5169327..5172480
Molecular Weight (calculated) 93390.30 Da
IEP (calculated) 6.07
GRAVY (calculated) -0.36
Length 837 amino acids
Sequence (TAIR10)
(BLAST)
001: MEGSSNSNSR GFNTSGVSDR NTEFLPVERL TTRSKPSSHV DEYVRSLFGS TSTHKSGEDD SLGIDPFVRS LEWGDVSLRQ WLDKPERSVD VFECLHVFRQ
101: IVEIVNAAHS QGIVVHNVRP SCFVMSSFNH VSFIESASCS DSGSDSLEDG PISQKEIGSS RREEAVSKAI AIEEKGVYNK LLERKIEKLE EEKTQPFPMK
201: HILAMETSWY TSPEEDFGSS STCASDVYRL GVLLFELFCP VPSREEKSRT MSSLRHRVLP PQILLKCPKE ASFCLWLLHP EPTCRPSMSD LLQSEFITEP
301: RDNLEEREAA IELRDRIEEQ ESLLEFLLLI QQRKQESAYR LQDTVSLLSS DIEQVVKRQL ILKKRGSSLS DFSKDDHQYT SGQPLMSFQA NEEPSAFLAS
401: RKRVRQGILA LENGVEVDEE SQGSTLLESS RLMRNFKKLE SVYFLTRRRQ MKAAASGKSL TRHSPLSSEN GRGSMIVSEK SSVSNPVAPK AFFNNDSRQG
501: GWIDPFLEGL CRYLSFSQLR VKADLKQGDL LNSSNLVCAL AFDREGELFA TAGVNKKIKI FECNSIVNDN RDIHYPVVEL AGRSKLSSLC WNSYIKSQIA
601: SSNFDGVVQI WDVARSQLVT EMKEHKKRVW SIDISSADPT LLASGSDDGT GVSIGTIKTK ANVCCVQFPS DSGRSLAFGS ADHKVYYYDL RNPKIPLCTM
701: IGHSKTVSYV KFVDSSTLVS SSTDNTLKLW DLSMSASGIN ESPLHSFTGH TNLKNFVGLS VSDGYIATGS ETNEVFVYHK AFPMPVMSYM FNNTDSMSGL
801: EVDDASQFIS SICWRGQSST LVAANSNGNI KILEMMT
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)