AT3G15095.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 9762 Blast hits to 6439 proteins in 764 species: Archae - 77; Bacteria - 1339; Metazoa - 3211; Fungi - 718; Plants - 437; Viruses - 131; Other Eukaryotes - 3849 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:5081996..5084050 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 75581.60 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 6.28 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.77 | ||||||||||||||||||||||||||||
| Length | 684 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MAETERPHRS SSINSSSNNN SGSSTDLFIC FTSRFSSSSS MRLSSKSIHS PARSACLTTS LSRRLRTSGS LKNASAGVLN SPMFGANGGR KRSGSGYENS 101: NNNNNNNIEP SSPKVTCIGQ VRVKTRKHVK KKMRARSRRK GGENSFRRSV DQNDGGGGCR FKASENRLVH LPVTICESLR SFGSELNCFF PCRSSCTENS 201: HGDGRRAESN NDGCGGGGGG SNSCGAVFTR WFVAVEETSG GKRREIELVV GGEDEVEEDR RRSRRRHVFE GLDLSEIEMK TEKKERGEEV GRMSICSPPK 301: NALLLMRCRS DPVKVAALAN RVRERQLSLN DGVYTEEEED ERRRRFELEI EDKKRIDLCE KWISGETTVE TEEVSVAVAE AEAEAEAEAP LPSNPATEEE 401: ERVKVVEDSI VEEEQEASKI LDSFEEEIEA TIMKKIEDEI RNAIEEEEKL AEMEELAVVA VAETEEVEES KEVVPDCIPQ NEERSEQGNR EPDPSPEVVM 501: RRSLQEETTE KEKTTATPYK VLPDCLLLMM CEPKLSMEVS KETWVCSTDF VRCLPGRPPA KKIPPEAVGD NHHHHQPKKR IVTAVDSNAS SRRRSIDRPP 601: LHLQPPRSSC SYPAAPPIIT AAAAVGEQRV AGANKVQPPV LPRCKSEPRK SASKLAPEAC FWKNRKLEPH PPATVGVGGA GVGF |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)