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AT3G15090.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31911558 (2020): mitochondrion
  • PMID:31871212 (2020): mitochondrion
  • PMID:31818904 (2020): mitochondrion
  • PMID:31520498 (2020): mitochondrion
  • PMID:31023727 (2019): mitochondrion
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:27943495 (2017): mitochondrion
  • PMID:23750852 (2013): mitochondrion
  • PMID:23673981 (2013): plastid plastid stroma plastoglobules
  • PMID:22550958 (2012): plastid
  • PMID:21311031 (2011): mitochondrion
  • PMID:19334764 (2009): plasma membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : GroES-like zinc-binding alcohol dehydrogenase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
GroES-like zinc-binding alcohol dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, zinc ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: Oxidoreductase, zinc-binding dehydrogenase family protein (TAIR:AT1G23740.1); Has 32555 Blast hits to 32407 proteins in 2523 species: Archae - 489; Bacteria - 20756; Metazoa - 1208; Fungi - 3376; Plants - 855; Viruses - 0; Other Eukaryotes - 5871 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:GQT-2836-MONOMEReggNOG:COG0604eggNOG:KOG1198EMBL:AP000370
EMBL:AY054292EMBL:AY132008EMBL:CP002686EnsemblPlants:AT3G15090
EnsemblPlants:AT3G15090.1entrez:820739Gene3D:3.40.50.720Gene3D:3.90.180.10
GeneID:820739GO:GO:0008270GO:GO:0016491Gramene:AT3G15090.1
gramene_plant_reactome:1119309gramene_plant_reactome:6873988hmmpanther:PTHR11695hmmpanther:PTHR11695:SF509
IntAct:Q9LK96InterPro:IPR002085InterPro:IPR011032InterPro:IPR013154
InterPro:IPR016040InterPro:IPR020843KEGG:ath:AT3G15090OMA:GGDVHNL
PANTHER:PTHR11695Pfam:PF08240Pfam:PF13602PhylomeDB:Q9LK96
Proteomes:UP000006548RefSeq:NP_188127.1SMART:SM00829SMR:Q9LK96
STRING:3702.AT3G15090.1SUPFAM:SSF50129SUPFAM:SSF51735TAIR:AT3G15090
UniGene:At.24361UniProt:Q9LK96
Coordinates (TAIR10) chr3:+:5076847..5078870
Molecular Weight (calculated) 39396.80 Da
IEP (calculated) 9.42
GRAVY (calculated) 0.02
Length 366 amino acids
Sequence (TAIR10)
(BLAST)
001: MRVMRSLRGN SGAGLVFRPA RLNSLRSVFT GCRAVILPRF GGPEVFELRE NVPVPNLNPN EVLVKAKAVS VNPLDCRIRA GYGRSVFQPH LPIIVGRDVS
101: GEVAAIGTSV KSLKVGQEVF GALHPTALRG TYTDYGILSE DELTEKPSSI SHVEASAIPF AALTAWRALK SNARITEGQR LLVFGGGGAV GFSAIQLAVA
201: SGCHVTASCV GQTKDRILAA GAEQAVDYTT EDIELAVKGK FDAVLDTIGG PETERIGINF LRKGGNYMTL QGEAASLTDK YGFVVGLPLA TSLLMKKKIQ
301: YQYSHGIDYW WTYMRADPEG LAEIQRLVGA GKLKIPVEKT FPITDVVAAH EAKEKKQIPG KVVLEF
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)