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AT3G15000.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : cobalt ion binding
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
cobalt ion binding; FUNCTIONS IN: cobalt ion binding; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: plastid developmental protein DAG, putative (TAIR:AT3G06790.2); Has 57621 Blast hits to 29750 proteins in 1231 species: Archae - 14; Bacteria - 7130; Metazoa - 26978; Fungi - 8402; Plants - 8184; Viruses - 944; Other Eukaryotes - 5969 (source: NCBI BLink).
Protein Annotations
BioGrid:6063eggNOG:ENOG410IVM7eggNOG:ENOG410YC7HEMBL:AF428427
EMBL:AK226420EMBL:AP000370EMBL:BT015868EMBL:CP002686
EnsemblPlants:AT3G15000EnsemblPlants:AT3G15000.1entrez:820729GeneID:820729
Genevisible:Q9LKA5GO:GO:0005739GO:GO:0009451GO:GO:0009507
GO:GO:0016554GO:GO:0050897GO:GO:0080156Gramene:AT3G15000.1
hmmpanther:PTHR31346hmmpanther:PTHR31346:SF4HOGENOM:HOG000243016InParanoid:Q9LKA5
IntAct:Q9LKA5KEGG:ath:AT3G15000OMA:HAGGMQQPaxDb:Q9LKA5
Pfam:Q9LKA5PhylomeDB:Q9LKA5PRIDE:Q9LKA5PRO:PR:Q9LKA5
ProteinModelPortal:Q9LKA5Proteomes:UP000006548RefSeq:NP_566496.1STRING:3702.AT3G15000.1
SwissPalm:Q9LKA5TAIR:AT3G15000UniGene:At.24349UniGene:At.67750
UniProt:Q9LKA5
Coordinates (TAIR10) chr3:+:5050321..5052121
Molecular Weight (calculated) 42872.10 Da
IEP (calculated) 9.61
GRAVY (calculated) -0.95
Length 395 amino acids
Sequence (TAIR10)
(BLAST)
001: MATHTISRSI LCRPAKSLSF LFTRSFASSA PLAKSPASSL LSRSRPLVAA FSSVFRGGLV SVKGLSTQAT SSSLNDPNPN WSNRPPKETI LLDGCDFEHW
101: LVVVEPPQGE PTRDEIIDSY IKTLAQIVGS EDEARMKIYS VSTRCYYAFG ALVSEDLSHK LKELSNVRWV LPDSYLDVRN KDYGGEPFID GKAVPYDPKY
201: HEEWIRNNAR ANERNRRNDR PRNNDRSRNF ERRRENMAGG PPPQRPPMGG PPPPPHIGGS APPPPHMGGS APPPPHMGQN YGPPPPNNMG GPRHPPPYGA
301: PPQNNMGGPR PPQNYGGTPP PNYGGAPPAN NMGGAPPPNY GGGPPPQYGA VPPPQYGGAP PQNNNYQQQG SGMQQPQYQN NYPPNRDGSG NPYQG
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)