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AT3G14990.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
golgi 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31520498 (2020): mitochondrion
  • PMID:31186290 (2019): cytosol None
  • PMID:30783145 (2019): extracellular region plant-type cell wall
  • PMID:27122571 (2016): mitochondrion
  • PMID:26572690 (2016): extracellular region plant-type cell wall
  • PMID:25900983 (2015): Golgi
  • PMID:25900983 (2015): Golgi Golgi apparatus Golgi membrane
  • PMID:25900983 (2015): Golgi trans-Golgi network
  • PMID:25900983 (2015): Golgi trans-Golgi network early endosome
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
  • PMID:25900983 (2015): plant-type vacuole plant-type vacuole membrane
  • PMID:23673981 (2013): plastid plastid stroma plastoglobules
  • PMID:21533090 (2011): extracellular region plant-type cell wall
  • PMID:21166475 (2011): cytosol
  • PMID:17644812 (2007): plasma membrane
  • PMID:17151019 (2007): plant-type vacuole
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Class I glutamine amidotransferase-like superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Class I glutamine amidotransferase-like superfamily protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: response to cadmium ion, thiamin biosynthetic process; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DJ-1 (InterPro:IPR006287), ThiJ/PfpI (InterPro:IPR002818); BEST Arabidopsis thaliana protein match is: Class I glutamine amidotransferase-like superfamily protein (TAIR:AT1G53280.1); Has 10802 Blast hits to 6415 proteins in 1883 species: Archae - 336; Bacteria - 9086; Metazoa - 526; Fungi - 85; Plants - 335; Viruses - 0; Other Eukaryotes - 434 (source: NCBI BLink).
Protein Annotations
BioGrid:6062eggNOG:COG0693eggNOG:KOG2764EMBL:AF326856
EMBL:AF349515EMBL:AK317457EMBL:AP000370EMBL:AY039574
EMBL:AY129490EMBL:CP002686EnsemblPlants:AT3G14990EnsemblPlants:AT3G14990.1
entrez:820728ExpressionAtlas:Q9FPF0Gene3D:3.40.50.880GeneID:820728
Genevisible:Q9FPF0GO:GO:0003713GO:GO:0005634GO:GO:0005773
GO:GO:0005774GO:GO:0005829GO:GO:0005886GO:GO:0006357
GO:GO:0009506GO:GO:0019172GO:GO:0019243GO:GO:0019249
GO:GO:0046686GO:GO:0070301GO:GO:1900409hmmpanther:PTHR11019
hmmpanther:PTHR11019:SF100HOGENOM:HOG000077645InParanoid:Q9FPF0IntAct:Q9FPF0
InterPro:IPR002818InterPro:IPR006287InterPro:IPR029062KEGG:ath:AT3G14990
KO:K03152OMA:NWSFEDTPaxDb:Q9FPF0Pfam:PF01965
Pfam:Q9FPF0PhylomeDB:Q9FPF0PRIDE:Q9FPF0PRO:PR:Q9FPF0
ProteinModelPortal:Q9FPF0Proteomes:UP000006548RefSeq:NP_001030698.1RefSeq:NP_188117.1
RefSeq:NP_850588.1SMR:Q9FPF0STRING:3702.AT3G14990.1SUPFAM:SSF52317
TAIR:AT3G14990TIGRfam:TIGR01383TIGRFAMs:TIGR01383UniGene:At.24369
UniGene:At.75204UniProt:Q9FPF0
Coordinates (TAIR10) chr3:+:5047510..5049621
Molecular Weight (calculated) 41859.70 Da
IEP (calculated) 5.08
GRAVY (calculated) 0.10
Length 392 amino acids
Sequence (TAIR10)
(BLAST)
001: MASFTKTVLI PIAHGTEPLE AVAMITVLRR GGADVTVASV ETQVGVDACH GIKMVADTLL SDITDSVFDL IVLPGGLPGG ETLKNCKSLE NMVKKQDSDG
101: RLNAAICCAP ALALGTWGLL EGKKATGYPV FMEKLAATCA TAVESRVQID GRIVTSRGPG TTIEFSITLI EQLFGKEKAD EVSSILLLRP NPGEEFTFTE
201: LNQTNWSFED TPQILVPIAE ESEEIEAIAL VDILRRAKAN VVIAAVGNSL EVEGSRKAKL VAEVLLDEVA EKSFDLIVLP GGLNGAQRFA SCEKLVNMLR
301: KQAEANKPYG GICASPAYVF EPNGLLKGKK ATTHPVVSDK LSDKSHIEHR VVVDGNVITS RAPGTAMEFS LAIVEKFYGR EKALQLGKAT LV
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)