AT3G14660.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:endoplasmic reticulum 0.638 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : cytochrome P450, family 72, subfamily A, polypeptide 13 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
putative cytochrome P450 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
cytochrome P450, family 72, subfamily A, polypeptide 13 (CYP72A13); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: response to cyclopentenone; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 72, subfamily A, polypeptide 15 (TAIR:AT3G14690.1); Has 31786 Blast hits to 31657 proteins in 1619 species: Archae - 67; Bacteria - 4951; Metazoa - 11303; Fungi - 6022; Plants - 7953; Viruses - 3; Other Eukaryotes - 1487 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:4924960..4926911 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 58462.50 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.79 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.12 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 512 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MEISVASVTV SVAVVVVSWW VWRTLQRVWL KPKMLESYLR RQGLAGTPYT PLVGDLKRNF SMLAEARSKP INLTDDITPR IVPYPLQMLK THGRTFFTWF 101: GPIPTITIMD PEQIKEVFNK VYDFQKAHTF PLGRLIAAGL VSYDGDKWTK HRRIINPAFH LEKIKNMVPA FHQSCSEIVG EWDKLVTDKQ SSCEVDIWPW 201: LVSMTADVIS RTAFGSSYKE GQRIFELQAE LAQLIIQAFR KAIIPGYRYF PTKGNRRMKA AAREIKFILR GIVNKRLRAR EAGEAPSDDL LGILLESNLG 301: QTKGNGMSTE ELMEECKLFY FAGQETTTVL LVWTMVLLSQ HQDWQARARE EVKQVFGDKE PDAEGLNQLK VMTMILYEVL RLYPPVVQLT RAIHKEMQLG 401: DLTLPGGVQI SLPILLIQRD RELWGNDAGE FKPDRFKDGL SKATKNQVSF FPFAWGPRIC IGQNFALLEA KMAMTLILRK FSFELSPSYV HAPYTVLTTH 501: PQFGAPLILH KL |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)