AT3G14610.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:endoplasmic reticulum 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : cytochrome P450, family 72, subfamily A, polypeptide 7 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
putative cytochrome P450 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
cytochrome P450, family 72, subfamily A, polypeptide 7 (CYP72A7); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 72, subfamily A, polypeptide 13 (TAIR:AT3G14660.1); Has 33011 Blast hits to 32901 proteins in 1695 species: Archae - 71; Bacteria - 5150; Metazoa - 11421; Fungi - 6601; Plants - 8312; Viruses - 3; Other Eukaryotes - 1453 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:4912565..4914503 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 58305.40 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.20 | ||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.10 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 512 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MSFSVVAALP VLVAVVVLWT WRIVKWVWIK PKMLESSLKR QGLTGTPYTP LVGDIKRNVD MMMEARSKPI NVTDDITPRL LPLALKMLNS HGKTFFIWIG 101: PLPTIVITNP EQIKEVFNKV NDFEKASTFP LIRLLAGGLA SYKGDKWASH RRIINPAFHL EKIKNMIPAF YHCCSEVVCQ WEKLFTDKES PLEVDVWPWL 201: VNMTADVISH TAFGSSYKEG QRIFQLQGEL AELIAQAFKK SYIPGSRFYP TKSNRRMKAI DREVDVILRG IVSKREKARE AGEPANDDLL GILLESNSEE 301: SQGNGMSVED VMKECKLFYF AGQETTSVLL VWTMVLLSHH QDWQARAREE VMQVLGENNK PDMESLNNLK VMTMIFNEVL RLYPPVAQLK RVVNKEMKLG 401: ELTLPAGIQI YLPTILVQRD TELWGDDAAD FKPERFRDGL SKATKNQVSF FPFGWGPRIC IGQNFAMLEA KMAMALILQK FSFELSPSYV HAPQTVMTTR 501: PQFGAHLILH KL |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)