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AT3G14595.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plasma membrane 0.959
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Ribosomal protein L18ae family
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Ribosomal protein L18ae family; BEST Arabidopsis thaliana protein match is: Ribosomal protein L18ae family (TAIR:AT1G17080.1); Has 132 Blast hits to 132 proteins in 17 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 129; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Protein Annotations
EMBL:BT025601EMBL:CP002686EnsemblPlants:AT3G14595EnsemblPlants:AT3G14595.1entrez:820686GeneID:820686GO:GO:0005840
GO:GO:0016021Gramene:AT3G14595.1hmmpanther:PTHR10052hmmpanther:PTHR10052:SF9HOGENOM:HOG000241589KEGG:ath:AT3G14595OMA:FSRNPRE
Proteomes:UP000006548RefSeq:NP_566490.1STRING:3702.AT3G14595.1TAIR:AT3G14595TMHMM:TMhelixUniGene:At.39206UniProt:Q1H563
Coordinates (TAIR10) chr3:+:4909037..4910226
Molecular Weight (calculated) 14469.30 Da
IEP (calculated) 8.84
GRAVY (calculated) -0.03
Length 132 amino acids
Sequence (TAIR10)
(BLAST)
001: MTSGGDDKNR SVVTDHQHQQ QPPPPFQGVS NYPPQQQPPA TGYPQPAQPY AQGYVVNGVR PTEHGRCCGI GIGWVLFILG FFFALPWYIG FFLLLFSRNP
101: RERPGYIACA VGAVFATIIV IFGTVRGSGV WS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)