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AT3G14560.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 0.996
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; Has 6 Blast hits to 6 proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 6; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410JSPIeggNOG:ENOG41108MDEMBL:AB023038EMBL:AF446868EMBL:AY045663EMBL:CP002686EnsemblPlants:AT3G14560
EnsemblPlants:AT3G14560.1entrez:820682GeneID:820682Gramene:AT3G14560.1HOGENOM:HOG000153120KEGG:ath:AT3G14560OMA:EVEINMS
Proteomes:UP000006548RefSeq:NP_566489.1TAIR:AT3G14560UniGene:At.8059UniProt:Q9LUD8
Coordinates (TAIR10) chr3:+:4889368..4889832
Molecular Weight (calculated) 17739.60 Da
IEP (calculated) 3.63
GRAVY (calculated) -0.46
Length 154 amino acids
Sequence (TAIR10)
(BLAST)
001: MASTQYGFEH QGGMEIINDE LILSFLEEES PVENHSSINK EEEEKLNRVI RSLEVEINMS SPTIEARKMN MQQTISGLED DFGWLNDFDI GMISLQNDDE
101: MMNWCTELSY MDGVVDSGVL EIEGGDYYSH INYALTFEEP TLSLWQENND VVMY
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)