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AT3G14300.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
extracellular 1.000
ASURE: extracellular
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data no PPI data
Description (TAIR10) protein_coding : pectinesterase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
ATPMEPCRC; FUNCTIONS IN: pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: cell wall; EXPRESSED IN: flower; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: pectin methylesterase 1 (TAIR:AT1G53840.1); Has 4699 Blast hits to 3111 proteins in 352 species: Archae - 11; Bacteria - 646; Metazoa - 6; Fungi - 210; Plants - 3801; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G14300-MONOMEREC:3.1.1.11eggNOG:COG4677EMBL:AB022220
EMBL:CP002686EnsemblPlants:AT3G14300EnsemblPlants:AT3G14300.1entrez:820650
Gene3D:1.20.140.40Gene3D:2.160.20.10GeneID:820650Genevisible:Q9LUL8
GO:GO:0005618GO:GO:0009506GO:GO:0016021GO:GO:0030599
GO:GO:0042545GO:GO:0043086GO:GO:0045330GO:GO:0045490
GO:GO:0046910GO:GO:0071944Gramene:AT3G14300.1gramene_pathway:3.1.1.11
gramene_pathway:PWY-1081hmmpanther:PTHR31707hmmpanther:PTHR31707:SF42InParanoid:Q9LUL8
InterPro:IPR000070InterPro:IPR006501InterPro:IPR011050InterPro:IPR012334
InterPro:IPR018040InterPro:IPR033131iPTMnet:Q9LUL8KEGG:00040+3.1.1.11
KEGG:00500+3.1.1.11KEGG:ath:AT3G14300PaxDb:Q9LUL8Pfam:PF01095
Pfam:PF04043Pfam:Q9LUL8PhylomeDB:Q9LUL8PRIDE:Q9LUL8
PRO:PR:Q9LUL8PROSITE:PS00503PROSITE:PS00800ProteinModelPortal:Q9LUL8
Proteomes:UP000006548RefSeq:NP_188047.1scanprosite:PS00503scanprosite:PS00800
SMART:SM00856SMR:Q9LUL8SUPFAM:SSF101148SUPFAM:SSF51126
TAIR:AT3G14300tair10-symbols:ATPME26tair10-symbols:ATPMEPCRCtair10-symbols:PME26
TIGRfam:TIGR01614TIGRFAMs:TIGR01614TMHMM:TMhelixUniGene:At.53309
UniPathway:UPA00545UniProt:Q9LUL8
Coordinates (TAIR10) chr3:-:4766905..4769898
Molecular Weight (calculated) 105634.00 Da
IEP (calculated) 8.22
GRAVY (calculated) -0.19
Length 968 amino acids
Sequence (TAIR10)
(BLAST)
001: MDTVKSINKG YGKVDETQDL ALKRKTRKRL YQIGISVAVL VAIIISSTVT IAIHSRKGNS PHPTPSSVPE LTPAASLKTV CSVTNYPVSC FSSISKLPLS
101: NTTDPEVIFR LSLQVVIDEL NSIVELPKKL AEETDDEGLK SALSVCEHLL DLAIDRVNET VSAMEVVDGK KILNAATIDD LLTWLSAAVT YHGTCLDALD
201: EISHTNSAIP LKLKSGMVNS TEFTSNSLAI VAKILSTISD FGIPIHGRRL LNSSPHATPI SVPKLTPAAS LRNVCSVTRY PASCVSSISK LPSSNTTDPE
301: ALFRLSLQVV INELNSIAGL PKKLAEETDD ERLKSSLSVC GDVFNDAIDI VNDTISTMEE VGDGKKILKS STIDEIQTWL SAAVTDHDTC LDALDELSQN
401: KTEYANSPIS LKLKSAMVNS RKFTSNSLAI IAKFPIHERH GVQSPRLRKS PHPTPSSVLR TVCNVTNYPA SCISSISKLP LSKTTTDPKV LFRLSLQVTF
501: DELNSIVGLP KKLAEETNDE GLKSALSVCA DVFDLAVDSV NDTISSLDEV ISGGKKNLNS STIGDLITWL SSAVTDIGTC GDTLDEDNYN SPIPQKLKSA
601: MVNSTEFTSN SLAIVAQVLK KPSKSRIPVQ GRRLLNSNSF PNWVRPGVRR LLQAKNLTPH VTVAADGSGD VRTVNEAVWR VPKKGKTMFV IYVKAGTYVE
701: NVLMKKDKWN VFIYGDGRDK TIISGSTNMV DGVRTFNTST FATEGKGFMM KDMGIINTAG PEKHQAVAFR SDSDRSVYYR CSFDGYQDTL YTHSNRQYYR
801: NCDVTGTVDF IFGAGTVVFQ GCSIRPRQPL PNQFNTITAE GTQEANQNTG ISIHQCTISP NGNVTATTYL GRPWKLFSKT VIMQSVIGSF VNPAGWIAWN
901: STYDPPPRTI FYREYKNSGP GSDLSKRVKW AGYKPISSDD EAARFTVKYF LRGDDNWIPK AVMGMPPL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)