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AT3G14160.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 0.986
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : 2-oxoglutarate-dependent dioxygenase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
2-oxoglutarate-dependent dioxygenase family protein; FUNCTIONS IN: oxidoreductase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate-dependent dioxygenase family protein (TAIR:AT3G14140.1); Has 1267 Blast hits to 1266 proteins in 595 species: Archae - 0; Bacteria - 933; Metazoa - 94; Fungi - 54; Plants - 83; Viruses - 2; Other Eukaryotes - 101 (source: NCBI BLink).
Protein Annotations
eggNOG:COG3145eggNOG:KOG2731EMBL:AP000600EMBL:CP002686EnsemblPlants:AT3G14160EnsemblPlants:AT3G14160.1entrez:820633
Gene3D:2.60.120.590GeneID:820633GO:GO:0006281GO:GO:0051213Gramene:AT3G14160.1hmmpanther:PTHR16557hmmpanther:PTHR16557:SF4
HOGENOM:HOG000122277InterPro:IPR004574InterPro:IPR005123InterPro:IPR027450KEGG:ath:AT3G14160OMA:YLSINDQPANTHER:PTHR16557
Pfam:PF13532Pfscan:PS51471PhylomeDB:Q9LJH2PROSITE:PS51471Proteomes:UP000006548RefSeq:NP_566479.5SMR:Q9LJH2
STRING:3702.AT3G14160.1SUPFAM:SSF51197TAIR:AT3G14160UniGene:At.8249UniProt:Q9LJH2
Coordinates (TAIR10) chr3:+:4693495..4695198
Molecular Weight (calculated) 49788.30 Da
IEP (calculated) 9.05
GRAVY (calculated) -0.72
Length 455 amino acids
Sequence (TAIR10)
(BLAST)
001: MNHSEARGSG GHKGYRGRSQ ASEQWVPVAA DDKSLEDSSG NRVRGSQGKG RSRTSWSPRN SYGRGNDEHS PVQAYVNKSN VGFVEKGVQQ DRKSLEDGIG
101: STKQPDDGAA AGDNKAVLQS KSTNVSGGSF VSSECEDKDG AKMYCDLVNR VNDVTLSCQE SVSSTVVQKV ELSSVEDQKS APKADGAGNS SNESSTRHFD
201: IFLEKKGIVL KPNLLVLSRE KKKAAKGYSG TVIRPGMVLL KNYLSINDQV MIVNKCRRLG LGEGGFYQPG YRDEAKLHLK MMCLGKNWDP ETSRYGETRP
301: FDGSTAPRIP AEFNQFVEKA VKESQSLAAS NSKQTKGGDE IPFMLPDICI VNFYSSTGRL GLHQDKDESE NSIRKGLPVV SFSIGDSAEF LYGDQRDEDK
401: AETLTLESGD VLLFGGRSRK VFHGVRSIRK DTAPKALLQE TSLRPGRLNL TFRQY
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)