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AT3G14060.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plastid 0.996
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:15610358 (2005): extracellular region
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G54120.1); Has 30 Blast hits to 30 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410J2NDeggNOG:ENOG411169JEMBL:AB019229EMBL:AY084400
EMBL:BT024813EMBL:CP002686EnsemblPlants:AT3G14060EnsemblPlants:AT3G14060.1
entrez:820620GeneID:820620GO:GO:0005618GO:GO:0005737
Gramene:AT3G14060.1hmmpanther:PTHR34788hmmpanther:PTHR34788:SF1HOGENOM:HOG000153144
KEGG:ath:AT3G14060OMA:AYYRTIVPhylomeDB:Q9LVJ2Proteomes:UP000006548
RefSeq:NP_566472.1TAIR:AT3G14060UniGene:At.39297UniProt:Q9LVJ2
Coordinates (TAIR10) chr3:-:4657174..4657551
Molecular Weight (calculated) 14416.90 Da
IEP (calculated) 11.73
GRAVY (calculated) -0.19
Length 125 amino acids
Sequence (TAIR10)
(BLAST)
001: MDPHLVITAA SSAFRWPSSR RKIYLRRRKP QVVRLGGKNS TPRGSFSLKK VVTRMRLKWL RLYYVRLVKK IKAYYRTIVK EFEEAGAATI QQRMTVETAA
101: FAAPGLGLSF CPMSGYVDQP RFFLV
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)