AT3G13784.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:extracellular 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : cell wall invertase 5 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
cell wall invertase 5 (CWINV5); FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: sucrose catabolic process, using beta-fructofuranosidase, carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, LP.10 ten leaves visible, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 32 (InterPro:IPR001362), Glycosyl hydrolases family 32, N-terminal (InterPro:IPR013148), Glycosyl hydrolase family 32, C-terminal (InterPro:IPR013189), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolases family 32 protein (TAIR:AT3G13790.2); Has 4239 Blast hits to 4169 proteins in 1239 species: Archae - 18; Bacteria - 2618; Metazoa - 95; Fungi - 286; Plants - 1036; Viruses - 0; Other Eukaryotes - 186 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:4528529..4530669 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 64280.40 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.30 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.41 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 569 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MANIVWCNIA MFLLVSLFLT DDAVVVLDAL DNVPNNIKNQ PYRTGYHFQP PKNWMNGPMI YKGIYHLFYQ WNQNGAVMDV NKTVWGHATS TDLINWITLS 101: PAIRPSRPSD INGCWSGSVT ILPNGKPVIL YTGNDRYNRQ VQNLVKPKNL TDPYLRHWTK SPENPLVTPS PVNHINSSAF RDPTTAWFGR DGRWRITTGS 201: QEGRRGLAIL HTSKDFVIWK QSPKPLHYHD GTGMWECPDF FPVARTDSRG LDTSFSSGPM VKHVLKVSLT DTFNDYYTIG TYDEVRDVYV PDKGFVQDET 301: APRYDYGKFY ASKTFYDSVN QRRILWGWVN ESSPEKDNIK KGWAGLQAIP RKVWLDESGK RLVQWPVKEI ERLRTTQVKW GNKLLKGGSV MEVHGVTAPQ 401: ADVEVFFKVS GFDLEKADVI EPGWTDPQLI CSQRNASSGL GPFGLMVLAS KNMEEYTSVN IRIFRAGENS KEHVVVMCSD QSTSSLEKGN DKTTYGAFLD 501: ISPYQPISLR TLIDKSIVES FGGKGKTCIT SRVYPKLAIG ERTHLFAFNK GSQNVNVLSL SAWSMKSSL |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)