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AT3G13730.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
endoplasmic reticulum 0.667
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : cytochrome P450, family 90, subfamily D, polypeptide 1
Curator
Summary (TAIR10)
Encodes a cytochrome P-450 gene that is involved in brassinosteroid biosynthesis, most likely in the conversion step of teasterone (TE) to 3-dehydroteasterone (3DT), and/or 6-deoxoteasterone (6-deoxoTE) to 6-deoxo-3-dehydroteasterone (6-deoxo3DT); or the conversion of cathasterone (CT) to TE, and/or 6-deoxocathasterone (6-deoxoCT) to 6-deoxoTE. Recently, CYP90D1 was shown to catalyse the C-23 hydroxylation of several brassinosteroids (the enzyme has a broad specificity for 22-hydroxylated substrates). Member of the CYP90C CYP450 family. Similar to Cytochrome P450 90C1 (ROT3).
Computational
Description (TAIR10)
cytochrome P450, family 90, subfamily D, polypeptide 1 (CYP90D1); FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of one atom of oxygen, oxygen binding; INVOLVED IN: stamen development, petal development, leaf development, brassinosteroid biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: Cytochrome P450 superfamily protein (TAIR:AT4G36380.1); Has 27722 Blast hits to 27661 proteins in 1582 species: Archae - 80; Bacteria - 4717; Metazoa - 10119; Fungi - 4209; Plants - 7293; Viruses - 6; Other Eukaryotes - 1298 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G13730-MONOMERBioCyc:MetaCyc:AT3G13730-MONOMEREC:1.14.13.112eggNOG:COG2124eggNOG:KOG0157EMBL:AB066286EMBL:AP001307
EMBL:BT004084EMBL:BT005093EMBL:CP002686EnsemblPlants:AT3G13730EnsemblPlants:AT3G13730.1entrez:820582Gene3D:1.10.630.10
GeneID:820582Genevisible:Q94IA6GO:GO:0005506GO:GO:0005789GO:GO:0010268GO:GO:0016021GO:GO:0016125
GO:GO:0016132GO:GO:0016709GO:GO:0020037GO:GO:0048366GO:GO:0048441GO:GO:0048443Gramene:AT3G13730.1
gramene_pathway:1.14.-.-gramene_pathway:1.14.13.-gramene_pathway:1.14.13.112gramene_pathway:2.7.7.-gramene_pathway:PWY-2582gramene_pathway:PWY-699gramene_plant_reactome:1119456
gramene_plant_reactome:6875096gramene_plant_reactome:6876165gramene_plant_reactome:6876432gramene_plant_reactome:6876718hmmpanther:PTHR24286hmmpanther:PTHR24286:SF30HOGENOM:HOG000237614
InParanoid:Q94IA6InterPro:IPR001128InterPro:IPR002401InterPro:IPR017972KEGG:ath:AT3G13730KO:K12638OMA:YLSDCPA
PaxDb:Q94IA6Pfam:PF00067Pfam:Q94IA6PhylomeDB:Q94IA6PRIDE:Q94IA6PRINTS:PR00463PRO:PR:Q94IA6
PROSITE:PS00086ProteinModelPortal:Q94IA6Proteomes:UP000006548Reactome:R-ATH-211916Reactome:R-ATH-5365859RefSeq:NP_566462.1scanprosite:PS00086
SMR:Q94IA6STRING:3702.AT3G13730.1SUPFAM:SSF48264TAIR:AT3G13730tair10-symbols:CYP90D1TMHMM:TMhelixUniGene:At.24699
UniPathway:UPA00381UniProt:Q94IA6
Coordinates (TAIR10) chr3:-:4498330..4500836
Molecular Weight (calculated) 56156.60 Da
IEP (calculated) 9.81
GRAVY (calculated) -0.13
Length 491 amino acids
Sequence (TAIR10)
(BLAST)
001: MDTSSSLLFF SFFFFIIIVI FNKINGLRSS PASKKKLNDH HVTSQSHGPK FPHGSLGWPV IGETIEFVSS AYSDRPESFM DKRRLMYGRV FKSHIFGTAT
101: IVSTDAEVNR AVLQSDSTAF VPFYPKTVRE LMGKSSILLI NGSLHRRFHG LVGSFLKSPL LKAQIVRDMH KFLSESMDLW SEDQPVLLQD VSKTVAFKVL
201: AKALISVEKG EDLEELKREF ENFISGLMSL PINFPGTQLH RSLQAKKNMV KQVERIIEGK IRKTKNKEED DVIAKDVVDV LLKDSSEHLT HNLIANNMID
301: MMIPGHDSVP VLITLAVKFL SDSPAALNLL TEENMKLKSL KELTGEPLYW NDYLSLPFTQ KVITETLRMG NVIIGVMRKA MKDVEIKGYV IPKGWCFLAY
401: LRSVHLDKLY YESPYKFNPW RWQERDMNTS SFSPFGGGQR LCPGLDLARL ETSVFLHHLV TRFRWIAEED TIINFPTVHM KNKLPIWIKR I
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)