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AT3G13710.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plasma membrane 1.000
ASURE: plasma membrane
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data
Description (TAIR10) protein_coding : prenylated RAB acceptor 1.F4
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
prenylated RAB acceptor 1.F4 (PRA1.F4); CONTAINS InterPro DOMAIN/s: Prenylated rab acceptor PRA1 (InterPro:IPR004895); BEST Arabidopsis thaliana protein match is: PRA1 (Prenylated rab acceptor) family protein (TAIR:AT3G13720.1); Has 446 Blast hits to 446 proteins in 97 species: Archae - 0; Bacteria - 0; Metazoa - 75; Fungi - 44; Plants - 296; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink).
Protein Annotations
BioGrid:5914eggNOG:COG5130eggNOG:KOG3142EMBL:AK229270EMBL:AP001307EMBL:BT029440EMBL:CP002686
EnsemblPlants:AT3G13710EnsemblPlants:AT3G13710.1entrez:820580GeneID:820580Genevisible:Q9LIC7GO:GO:0005783GO:GO:0010008
GO:GO:0016021GO:GO:0016192Gramene:AT3G13710.1hmmpanther:PTHR19317hmmpanther:PTHR19317:SF2HOGENOM:HOG000238420InParanoid:Q9LIC7
IntAct:Q9LIC7InterPro:IPR004895KEGG:ath:AT3G13710OMA:NHESISRPaxDb:Q9LIC7Pfam:PF03208Pfam:Q9LIC7
PhylomeDB:Q9LIC7PRIDE:Q9LIC7PRO:PR:Q9LIC7Proteomes:UP000006548RefSeq:NP_187984.1STRING:3702.AT3G13710.1TAIR:AT3G13710
tair10-symbols:PRA1.F4TMHMM:TMhelixUniGene:At.39361UniProt:Q9LIC7
Coordinates (TAIR10) chr3:-:4492992..4493558
Molecular Weight (calculated) 21002.60 Da
IEP (calculated) 9.00
GRAVY (calculated) 0.48
Length 188 amino acids
Sequence (TAIR10)
(BLAST)
001: MANNDEITTS SHASPAVNHE SISRAKQRIK DGLATRRSWR VMFDLHSTGL PHGVSDVFSR IKTNLAYFRS NYAIVILNVI FFSLIWHPTS LIVFTGLVFL
101: WIFLYFLRDV PLKVFRFQID DRAVLIGLSV ITIVLLLLTN ATFNIVAALM AGAVLVLIHA VIRKTDDLFL DEEAATTETS GLTSHPSS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)