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AT3G13440.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity, nucleic acid binding; INVOLVED IN: methylation, acetate biosynthetic process from carbon monoxide, methanol oxidation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Methyltransferase small (InterPro:IPR007848), DNA methylase, N-6 adenine-specific, conserved site (InterPro:IPR002052); Has 2452 Blast hits to 2450 proteins in 945 species: Archae - 168; Bacteria - 1395; Metazoa - 177; Fungi - 134; Plants - 115; Viruses - 0; Other Eukaryotes - 463 (source: NCBI BLink).
Protein Annotations
eggNOG:COG2890eggNOG:KOG3191EMBL:AY074576EMBL:AY097379EMBL:CP002686EnsemblPlants:AT3G13440EnsemblPlants:AT3G13440.1
entrez:820545Gene3D:3.40.50.150GeneID:820545GO:GO:0003676GO:GO:0008276Gramene:AT3G13440.1hmmpanther:PTHR18895
hmmpanther:PTHR18895:SF71HOGENOM:HOG000219949IntAct:Q8VXU9InterPro:IPR002052InterPro:IPR004557InterPro:IPR007848InterPro:IPR029063
KEGG:ath:AT3G13440KO:K19589OMA:SGCVSSFPfam:PF05175Pfam:PF13659PhylomeDB:Q8VXU9PROSITE:PS00092
Proteomes:UP000006548RefSeq:NP_187952.1scanprosite:PS00092SMR:Q8VXU9STRING:3702.AT3G13440.1SUPFAM:SSF53335TAIR:AT3G13440
TIGRfam:TIGR00537TIGRFAMs:TIGR00537UniGene:At.27985UniGene:At.75182UniProt:Q8VXU9
Coordinates (TAIR10) chr3:+:4378338..4379347
Molecular Weight (calculated) 30765.90 Da
IEP (calculated) 4.75
GRAVY (calculated) -0.09
Length 278 amino acids
Sequence (TAIR10)
(BLAST)
001: MADQGLEESN PMDLSKHPSG IVPTPHSQVI YKMPPRIAAI RLVSSHREVY EPCDDSFALV DALLADRTNL IEHNPKICME IGCGSGYVIT SLILLLQNEV
101: PGVHYLAIDT NPIATRVTKE TLEAHGVNAD VICADLATGL EKRLAGSVDV IVVNPPYVPT PEYEVGMEGI ASAWAGGENG RTVIDKILPV VDLLLSEKGW
201: FYLVTLTSNF PAEICLMMRK KGYASRIVVQ RSTEEENLVI LKFWRDKDEE SQDKETSSSS FVSQFSKSLS SLMEKQWR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)