suba logo
AT3G12520.1
Subcellular Consensus
(Prediction and Experimental)

min: heatmap :max

.
SUBAcon:
vacuole 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:15367713 (2004): plant-type vacuole
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : sulfate transporter 4;2
Curator
Summary (TAIR10)
Encodes a sulfate transporter that in induced under sulfate limitation.
Computational
Description (TAIR10)
sulfate transporter 4;2 (SULTR4;2); FUNCTIONS IN: sulfate transmembrane transporter activity; INVOLVED IN: sulfate transport, transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sulphate transporter (InterPro:IPR011547), Sulphate transporter/antisigma-factor antagonist STAS (InterPro:IPR002645), Sulphate anion transporter, conserved site (InterPro:IPR018045), Sulphate anion transporter (InterPro:IPR001902); BEST Arabidopsis thaliana protein match is: sulfate transporter 4.1 (TAIR:AT5G13550.1); Has 12030 Blast hits to 11931 proteins in 2162 species: Archae - 35; Bacteria - 7744; Metazoa - 1170; Fungi - 435; Plants - 553; Viruses - 0; Other Eukaryotes - 2093 (source: NCBI BLink).
Protein Annotations
eggNOG:COG0659eggNOG:KOG0236EMBL:AB052775EMBL:AC069474EMBL:AK117615EMBL:AP002047EMBL:CP002686
EnsemblPlants:AT3G12520EnsemblPlants:AT3G12520.1entrez:820431Gene3D:3.30.750.24GeneID:820431Genevisible:Q8GYH8GO:GO:0005887
GO:GO:0008271GO:GO:0015116GO:GO:0015293GO:GO:1902358hmmpanther:PTHR11814hmmpanther:PTHR11814:SF55HOGENOM:HOG000199844
InParanoid:Q8GYH8InterPro:IPR001902InterPro:IPR002645InterPro:IPR011547InterPro:IPR018045iPTMnet:Q8GYH8KEGG:ath:AT3G12520
KO:K18059OMA:EETRMAYPANTHER:PTHR11814PaxDb:Q8GYH8Pfam:PF00916Pfam:PF01740Pfam:Q8GYH8
Pfscan:PS50801PhylomeDB:Q8GYH8PRIDE:Q8GYH8PRO:PR:Q8GYH8PROSITE:PS01130PROSITE:PS50801ProteinModelPortal:Q8GYH8
Proteomes:UP000006548RefSeq:NP_001189871.1RefSeq:NP_187858.1scanprosite:PS01130SMR:Q8GYH8STRING:3702.AT3G12520.1SUPFAM:SSF52091
TAIR:AT3G12520tair10-symbols:SULTR4;2TIGRfam:TIGR00815TIGRFAMs:TIGR00815TMHMM:TMhelixUniGene:At.43106UniGene:At.5433
UniProt:Q8GYH8
Coordinates (TAIR10) chr3:-:3967976..3971891
Molecular Weight (calculated) 74666.40 Da
IEP (calculated) 8.78
GRAVY (calculated) 0.40
Length 677 amino acids
Sequence (TAIR10)
(BLAST)
001: MSLAVKDLST ASSSSSKAIP VKIIPLQYPD STSSDPHCHS IPFNDFFSRW TAKIKRMTFF DWIDAIFPCF LWIRTYRWHQ YFKLDLMAGI TVGIMLVPQA
101: MSYARLAGLQ PIYGLYSSFV PVFVYAVFGS SRQLAVGPVA LVSLLVSNAL SGIVDPSEEL YTELAILLAL MVGIFESIMG FLRLGWLIRF ISHSVISGFT
201: TASAVVIGLS QLKYFLGYSV SRSSKIMPVI DSIIAGADQF KWPPFLLGCT ILVILLVMKH VGKAKKELRF IRAAGPLTGL ALGTIIAKVF HPPSITLVGD
301: IPQGLPKFSF PKSFDHAKLL LPTSALITGV AILESVGIAK ALAAKNRYEL DSNSELFGLG VANIFGSLFS AYPTTGSFSR SAVNSESEAK TGLSGLVTGI
401: IIGCSLLFLT PMFKFIPQCA LAAIVISAVS GLVDYEGAIF LWRVDKRDFT LWTITSTTTL FFGIEIGVLI GVGFSLAFVI HESANPHIAV LGRLPGTTVY
501: RNMKQYPEAY TYNGIVIVRI DAPIYFANIS YIKDRLREYE VAIDKHTSKG PDMERIYFVI LEMSPVTYID SSAVEALKDL YEEYKTRGIQ LAISNPNKEV
601: LLTLARAGIV ELIGKEWFFV RVHDAVQVCV HYVNRPTDVE ESSKPSLWRR SGLKNSSTYT EVESNIVLEE PLLSREK
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)