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AT3G12345.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plastid 1.000
ASURE: plastid
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; LOCATED IN: chloroplast; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Protein Annotations
eggNOG:COG0545eggNOG:KOG0552EMBL:AK175198EMBL:AK175322EMBL:AK175376EMBL:AK176669EMBL:AK176766
EMBL:AP002047EMBL:AY099869EMBL:BT000331EMBL:CP002686EMBL:FJ403374EnsemblPlants:AT3G12345EnsemblPlants:AT3G12345.1
entrez:3768848GeneID:3768848GO:GO:0009507GO:GO:0016853Gramene:AT3G12345.1hmmpanther:PTHR14154hmmpanther:PTHR14154:SF15
InterPro:IPR023329KEGG:ath:AT3G12345OMA:IQVYFVAProteomes:UP000006548RefSeq:NP_001030679.1SMR:Q9LHH3STRING:3702.AT3G12345.1
SUPFAM:0043399SUPFAM:SSF103511TAIR:AT3G12345UniGene:At.39612UniProt:Q9LHH3
Coordinates (TAIR10) chr3:-:3930333..3930893
Molecular Weight (calculated) 20150.20 Da
IEP (calculated) 10.19
GRAVY (calculated) -0.23
Length 186 amino acids
Sequence (TAIR10)
(BLAST)
001: MAITPLRITN PFPSLRFIPA GKPNALRIFT VHATDVESTE DTQPDPETTQ SESGTDPDQF ESRLSNIRLR YRSGTGKKAE VRKSKKGSSG SPSKGTGIYL
101: PPVSLKEAVS GGLKVEPGFS PFSERINGRI AGLGLTALLL VELATGKSVL NYHTPSVVFL QIYFVAAVSA MFVKIEKEKV SVWPKD
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)