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AT3G12200.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 0.806
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:24134884 (2013): cytoskeleton microtubules
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : NIMA-related kinase 7
Curator
Summary (TAIR10)
Encodes AtNek7, a member of the NIMA-related serine/threonine kinases (Neks) that have been linked to cell-cycle regulation in fungi and mammals. Plant Neks might be involved in plant development processes.
Computational
Description (TAIR10)
NIMA-related kinase 7 (Nek7); FUNCTIONS IN: protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, active site (InterPro:IPR008266), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: NIMA-related kinase 5 (TAIR:AT3G20860.1); Has 97728 Blast hits to 96752 proteins in 2792 species: Archae - 79; Bacteria - 10263; Metazoa - 38148; Fungi - 10471; Plants - 20939; Viruses - 426; Other Eukaryotes - 17402 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G12200-MONOMERBioCyc:ARA:GQT-618-MONOMERBioGrid:5731EC:2.7.11.1eggNOG:ENOG410Y7JFeggNOG:KOG0589EMBL:AC069472
EMBL:AP002047EMBL:AY062450EMBL:BT015419EMBL:CP002686EnsemblPlants:AT3G12200EnsemblPlants:AT3G12200.1entrez:820397
ExpressionAtlas:Q9LHI7GeneID:820397Genevisible:Q9LHI7GO:GO:0004674GO:GO:0005524hmmpanther:PTHR24362hmmpanther:PTHR24362:SF201
HOGENOM:HOG000238503InParanoid:Q9LHI7IntAct:Q9LHI7InterPro:IPR000719InterPro:IPR008266InterPro:IPR011009iPTMnet:Q9LHI7
PaxDb:Q9LHI7Pfam:PF00069Pfam:Q9LHI7Pfscan:PS50011PhylomeDB:Q9LHI7PRIDE:Q9LHI7PRO:PR:Q9LHI7
PROSITE:PS00109PROSITE:PS50011ProteinModelPortal:Q9LHI7Proteomes:UP000006548Reactome:R-ATH-179409RefSeq:NP_187827.1scanprosite:PS00109
SMR:Q9LHI7SUPFAM:SSF56112TAIR:AT3G12200tair10-symbols:AtNek7tair10-symbols:Nek7UniGene:At.27338UniProt:Q9LHI7
Coordinates (TAIR10) chr3:-:3887173..3890550
Molecular Weight (calculated) 63703.00 Da
IEP (calculated) 6.02
GRAVY (calculated) -0.46
Length 571 amino acids
Sequence (TAIR10)
(BLAST)
001: MQMEANDCQE EHKFTLDNYH VVEQVRRGKS SSDFVVLHDI EDKKYAMKKI CLAKHTDKLK QTALQEMKLL SSLKNPYIVH YEDSWIDNDN NACIFTAYYE
101: GGNMANAIKK ARGKLFPEER IFKWLAQLLL AVNYLHSNRV VHMDLTCSNI FLPKDDHVQL GNYGLAKLIN PEKPVSMVSG ISNSMCPEVL EDQPYGYKSD
201: IWSLGCCMYE ITAHQPAFKA PDMAGLINKI NRSLMSPLPI VYSSTLKQMI KLMLRKKPEY RPTACELLRN PSLQPYLLQC QNLSPIYLPV FPIKPVNSPK
301: DKARRNSLPG KFGKERVSRE KSEVSRSLEN LYPFWTNTET GSSSSSQPAS STNGAEDKLE TKRIDPSCDT LKISEFTSQK SDESLIDPDI AVYSTETPAE
401: ENALPKETEN IFSEESQLRD VDVGVVSAQE VACSPPRAIE EAETQEALPK PKEQITVPIS SVAHSSTEVA AAKDHLSGSL EGDKAKMVKL TASEMSSVLS
501: KLTKLGPPQS KERADALECL LEKCAGLVKQ EKYEELAGLL TPFGEDGVSA RDTAIWFAKT LLSSDKLNQG T
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)